Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
SNX3O60493 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SNX3O60493 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SNX3O60493 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
SNX3O60493 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SNX3O60493 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SNX3O60493 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.47□□□□□ -1.53
SNX3O60493 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SNX3O60493 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SNX3O60493 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.46□□□□□ -1.53
SNX3O60493 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
SNX3O60493 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SNX3O60493 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SNX3O60493 AC144833.1-201ENST00000567953 4089 ntBASIC5.46□□□□□ -1.53
SNX3O60493 PWAR1-201ENST00000624188 2414 ntBASIC5.46□□□□□ -1.53
SNX3O60493 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.46□□□□□ -1.54
SNX3O60493 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SNX3O60493 GAPDHP24-201ENST00000328713 983 ntBASIC5.46□□□□□ -1.54
SNX3O60493 RNU6-386P-201ENST00000362650 107 ntBASIC5.46□□□□□ -1.54
SNX3O60493 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SNX3O60493 RPL10P10-201ENST00000403509 664 ntBASIC5.46□□□□□ -1.54
SNX3O60493 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.46□□□□□ -1.54
SNX3O60493 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.46□□□□□ -1.54
SNX3O60493 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.46□□□□□ -1.54
SNX3O60493 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SNX3O60493 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.46□□□□□ -1.54
SNX3O60493 RPL34P6-201ENST00000432390 345 ntBASIC5.46□□□□□ -1.54
SNX3O60493 AC009244.1-201ENST00000450566 258 ntBASIC5.46□□□□□ -1.54
SNX3O60493 AC093827.1-201ENST00000480094 861 ntBASIC5.46□□□□□ -1.54
SNX3O60493 AC099521.1-201ENST00000482557 334 ntBASIC5.46□□□□□ -1.54
SNX3O60493 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC5.46□□□□□ -1.54
SNX3O60493 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.46□□□□□ -1.54
SNX3O60493 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.46□□□□□ -1.54
SNX3O60493 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.46□□□□□ -1.54
SNX3O60493 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.46□□□□□ -1.54
SNX3O60493 OR5D2P-201ENST00000524390 911 ntBASIC5.46□□□□□ -1.54
SNX3O60493 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.46□□□□□ -1.54
SNX3O60493 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.46□□□□□ -1.54
SNX3O60493 TDGP1-201ENST00000543961 1229 ntBASIC5.46□□□□□ -1.54
SNX3O60493 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SNX3O60493 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.46□□□□□ -1.54
SNX3O60493 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.46□□□□□ -1.54
SNX3O60493 AC009268.1-201ENST00000561352 1203 ntBASIC5.46□□□□□ -1.54
SNX3O60493 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.46□□□□□ -1.54
SNX3O60493 MRPL45P2-203ENST00000573318 473 ntBASIC5.46□□□□□ -1.54
SNX3O60493 RN7SL32P-201ENST00000580514 281 ntBASIC5.46□□□□□ -1.54
SNX3O60493 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.46□□□□□ -1.54
SNX3O60493 AC239803.2-201ENST00000610161 430 ntBASIC5.46□□□□□ -1.54
SNX3O60493 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SNX3O60493 AC103564.3-201ENST00000621194 220 ntBASIC5.46□□□□□ -1.54
SNX3O60493 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.46□□□□□ -1.54
SNX3O60493 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SNX3O60493 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.46□□□□□ -1.54
SNX3O60493 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SNX3O60493 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.46□□□□□ -1.54
SNX3O60493 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SNX3O60493 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SNX3O60493 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.46□□□□□ -1.54
SNX3O60493 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.46□□□□□ -1.54
SNX3O60493 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
SNX3O60493 AL022393.1-201ENST00000625142 1677 ntBASIC5.46□□□□□ -1.54
SNX3O60493 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
SNX3O60493 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SNX3O60493 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SNX3O60493 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.46□□□□□ -1.54
SNX3O60493 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SNX3O60493 AL672167.1-204ENST00000641875 3017 ntBASIC5.45□□□□□ -1.54
SNX3O60493 AP001642.1-201ENST00000624727 2117 ntBASIC5.45□□□□□ -1.54
SNX3O60493 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.45□□□□□ -1.54
SNX3O60493 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SNX3O60493 CASC19-248ENST00000641674 1356 ntBASIC5.45□□□□□ -1.54
SNX3O60493 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SNX3O60493 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SNX3O60493 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SNX3O60493 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SNX3O60493 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SNX3O60493 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SNX3O60493 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.45□□□□□ -1.54
SNX3O60493 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
SNX3O60493 AL607077.1-201ENST00000401718 499 ntBASIC5.45□□□□□ -1.54
SNX3O60493 MTND3P20-201ENST00000407663 186 ntBASIC5.45□□□□□ -1.54
SNX3O60493 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.45□□□□□ -1.54
SNX3O60493 RN7SKP29-201ENST00000410957 272 ntBASIC5.45□□□□□ -1.54
SNX3O60493 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.45□□□□□ -1.54
SNX3O60493 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX3O60493 RCC2P2-201ENST00000422174 918 ntBASIC5.45□□□□□ -1.54
SNX3O60493 AC104333.2-201ENST00000422630 192 ntBASIC5.45□□□□□ -1.54
SNX3O60493 AL138479.1-201ENST00000426913 484 ntBASIC5.45□□□□□ -1.54
SNX3O60493 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.45□□□□□ -1.54
SNX3O60493 AC007679.3-201ENST00000434035 414 ntBASIC5.45□□□□□ -1.54
SNX3O60493 MAPRE1P3-201ENST00000435438 796 ntBASIC5.45□□□□□ -1.54
SNX3O60493 AC128677.1-201ENST00000436016 442 ntBASIC5.45□□□□□ -1.54
SNX3O60493 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.45□□□□□ -1.54
SNX3O60493 RAB9AP5-201ENST00000437794 597 ntBASIC5.45□□□□□ -1.54
SNX3O60493 BMS1P11-201ENST00000442351 885 ntBASIC5.45□□□□□ -1.54
SNX3O60493 GTF3AP5-201ENST00000442645 697 ntBASIC5.45□□□□□ -1.54
SNX3O60493 RAB9AP2-201ENST00000443911 597 ntBASIC5.45□□□□□ -1.54
SNX3O60493 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC5.45□□□□□ -1.54
SNX3O60493 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.45□□□□□ -1.54
SNX3O60493 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms