Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.68□□□□□ -1.5
RIPK2O43353 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.68□□□□□ -1.5
RIPK2O43353 TUBB4BP6-201ENST00000437576 479 ntBASIC5.68□□□□□ -1.5
RIPK2O43353 RAB9AP5-201ENST00000437794 597 ntBASIC5.68□□□□□ -1.5
RIPK2O43353 PA2G4P1-201ENST00000442248 1197 ntBASIC5.68□□□□□ -1.5
RIPK2O43353 RAB9AP2-201ENST00000443911 597 ntBASIC5.68□□□□□ -1.5
RIPK2O43353 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.68□□□□□ -1.5
RIPK2O43353 AC107015.1-201ENST00000466902 747 ntBASIC5.68□□□□□ -1.5
RIPK2O43353 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RIPK2O43353 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.68□□□□□ -1.5
RIPK2O43353 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.68□□□□□ -1.5
RIPK2O43353 AC098976.1-201ENST00000513014 541 ntBASIC5.68□□□□□ -1.5
RIPK2O43353 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.68□□□□□ -1.5
RIPK2O43353 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.68□□□□□ -1.5
RIPK2O43353 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.68□□□□□ -1.5
RIPK2O43353 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RIPK2O43353 HSPE1P2-201ENST00000554777 306 ntBASIC5.68□□□□□ -1.5
RIPK2O43353 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.68□□□□□ -1.5
RIPK2O43353 AL078601.3-201ENST00000573303 535 ntBASIC5.68□□□□□ -1.5
RIPK2O43353 MIR4776-2-201ENST00000580204 80 ntBASIC5.68□□□□□ -1.5
RIPK2O43353 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.68□□□□□ -1.5
RIPK2O43353 AC090607.5-201ENST00000615692 224 ntBASIC5.68□□□□□ -1.5
RIPK2O43353 AC004801.6-201ENST00000616571 978 ntBASIC5.68□□□□□ -1.5
RIPK2O43353 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.68□□□□□ -1.5
RIPK2O43353 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RIPK2O43353 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RIPK2O43353 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
RIPK2O43353 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RIPK2O43353 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RIPK2O43353 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RIPK2O43353 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RIPK2O43353 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.68□□□□□ -1.5
RIPK2O43353 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
RIPK2O43353 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.68□□□□□ -1.5
RIPK2O43353 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RIPK2O43353 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.67□□□□□ -1.5
RIPK2O43353 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RIPK2O43353 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.67□□□□□ -1.5
RIPK2O43353 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
RIPK2O43353 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RIPK2O43353 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RIPK2O43353 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RIPK2O43353 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
RIPK2O43353 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.67□□□□□ -1.5
RIPK2O43353 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RIPK2O43353 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RIPK2O43353 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.67□□□□□ -1.5
RIPK2O43353 RPSAP35-201ENST00000413753 818 ntBASIC5.67□□□□□ -1.5
RIPK2O43353 MRPL53P1-201ENST00000414323 319 ntBASIC5.67□□□□□ -1.5
RIPK2O43353 RPL12P43-201ENST00000420608 499 ntBASIC5.67□□□□□ -1.5
RIPK2O43353 TRGV7-201ENST00000427089 353 ntBASIC5.67□□□□□ -1.5
RIPK2O43353 RPL7AP49-201ENST00000429522 581 ntBASIC5.67□□□□□ -1.5
RIPK2O43353 AL591438.1-201ENST00000433508 581 ntBASIC5.67□□□□□ -1.5
RIPK2O43353 AC090804.1-201ENST00000448870 490 ntBASIC5.67□□□□□ -1.5
RIPK2O43353 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.67□□□□□ -1.5
RIPK2O43353 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
RIPK2O43353 RPL32P33-201ENST00000487023 394 ntBASIC5.67□□□□□ -1.5
RIPK2O43353 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.67□□□□□ -1.5
RIPK2O43353 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.67□□□□□ -1.5
RIPK2O43353 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.67□□□□□ -1.5
RIPK2O43353 DUTP7-201ENST00000507982 486 ntBASIC5.67□□□□□ -1.5
RIPK2O43353 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.67□□□□□ -1.5
RIPK2O43353 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RIPK2O43353 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.67□□□□□ -1.5
RIPK2O43353 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.67□□□□□ -1.5
RIPK2O43353 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.67□□□□□ -1.5
RIPK2O43353 AC006530.1-201ENST00000555980 571 ntBASIC5.67□□□□□ -1.5
RIPK2O43353 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.67□□□□□ -1.5
RIPK2O43353 MIR4311-201ENST00000580794 100 ntBASIC5.67□□□□□ -1.5
RIPK2O43353 MIR4260-201ENST00000583107 67 ntBASIC5.67□□□□□ -1.5
RIPK2O43353 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.67□□□□□ -1.5
RIPK2O43353 AC108738.1-201ENST00000603703 237 ntBASIC5.67□□□□□ -1.5
RIPK2O43353 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.67□□□□□ -1.5
RIPK2O43353 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.67□□□□□ -1.5
RIPK2O43353 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RIPK2O43353 MIR6823-201ENST00000622118 61 ntBASIC5.67□□□□□ -1.5
RIPK2O43353 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.67□□□□□ -1.5
RIPK2O43353 AC022919.1-201ENST00000624979 626 ntBASIC5.67□□□□□ -1.5
RIPK2O43353 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.67□□□□□ -1.5
RIPK2O43353 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RIPK2O43353 AC027228.2-201ENST00000567141 2154 ntBASIC5.67□□□□□ -1.5
RIPK2O43353 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
RIPK2O43353 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RIPK2O43353 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.67□□□□□ -1.5
RIPK2O43353 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RIPK2O43353 AL354854.1-201ENST00000455940 1363 ntBASIC5.67□□□□□ -1.5
RIPK2O43353 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RIPK2O43353 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RIPK2O43353 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
RIPK2O43353 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.66□□□□□ -1.5
RIPK2O43353 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RIPK2O43353 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RIPK2O43353 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RIPK2O43353 AC144833.1-201ENST00000567953 4089 ntBASIC5.66□□□□□ -1.5
RIPK2O43353 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
RIPK2O43353 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
RIPK2O43353 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RIPK2O43353 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
RIPK2O43353 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RIPK2O43353 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms