Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC7.29□□□□□ -1.24
SOX1O00570 HCG17-214ENST00000453558 732 ntTSL 5 BASIC7.29□□□□□ -1.24
SOX1O00570 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC7.29□□□□□ -1.24
SOX1O00570 RPL35AP19-201ENST00000469425 329 ntBASIC7.29□□□□□ -1.24
SOX1O00570 SETP11-201ENST00000473027 690 ntBASIC7.29□□□□□ -1.24
SOX1O00570 AC090589.1-201ENST00000473109 362 ntBASIC7.29□□□□□ -1.24
SOX1O00570 RN7SL799P-201ENST00000475891 298 ntBASIC7.29□□□□□ -1.24
SOX1O00570 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC7.29□□□□□ -1.24
SOX1O00570 OR7E99P-201ENST00000505750 922 ntBASIC7.29□□□□□ -1.24
SOX1O00570 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC7.29□□□□□ -1.24
SOX1O00570 AC026782.2-201ENST00000510845 636 ntBASIC7.29□□□□□ -1.24
SOX1O00570 RNA5SP271-201ENST00000516700 88 ntBASIC7.29□□□□□ -1.24
SOX1O00570 RNU6-528P-201ENST00000516926 100 ntBASIC7.29□□□□□ -1.24
SOX1O00570 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC7.29□□□□□ -1.24
SOX1O00570 AP000619.3-201ENST00000535634 1127 ntBASIC7.29□□□□□ -1.24
SOX1O00570 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC7.29□□□□□ -1.24
SOX1O00570 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.29□□□□□ -1.24
SOX1O00570 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC7.29□□□□□ -1.24
SOX1O00570 AC116553.2-201ENST00000564203 463 ntBASIC7.29□□□□□ -1.24
SOX1O00570 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC7.29□□□□□ -1.24
SOX1O00570 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.29□□□□□ -1.24
SOX1O00570 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC7.29□□□□□ -1.24
SOX1O00570 AC010857.1-201ENST00000606398 594 ntBASIC7.29□□□□□ -1.24
SOX1O00570 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC7.29□□□□□ -1.24
SOX1O00570 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC7.29□□□□□ -1.24
SOX1O00570 AC008498.1-201ENST00000613012 531 ntBASIC7.29□□□□□ -1.24
SOX1O00570 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC7.29□□□□□ -1.24
SOX1O00570 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SOX1O00570 AC132825.1-201ENST00000463573 2247 ntBASIC7.29□□□□□ -1.24
SOX1O00570 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.29□□□□□ -1.24
SOX1O00570 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
SOX1O00570 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
SOX1O00570 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC7.29□□□□□ -1.24
SOX1O00570 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.29□□□□□ -1.24
SOX1O00570 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
SOX1O00570 AC006141.1-201ENST00000581917 2170 ntBASIC7.29□□□□□ -1.24
SOX1O00570 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
SOX1O00570 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC7.29□□□□□ -1.24
SOX1O00570 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC7.29□□□□□ -1.24
SOX1O00570 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
SOX1O00570 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.28□□□□□ -1.24
SOX1O00570 AL136146.1-201ENST00000529830 1667 ntBASIC7.28□□□□□ -1.24
SOX1O00570 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SOX1O00570 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
SOX1O00570 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
SOX1O00570 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.28□□□□□ -1.24
SOX1O00570 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
SOX1O00570 MRPS17P1-201ENST00000596009 3130 ntBASIC7.28□□□□□ -1.24
SOX1O00570 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SOX1O00570 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
SOX1O00570 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
SOX1O00570 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
SOX1O00570 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC7.28□□□□□ -1.24
SOX1O00570 Y_RNA.192-201ENST00000363977 102 ntBASIC7.28□□□□□ -1.24
SOX1O00570 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SOX1O00570 RNU6-1200P-201ENST00000384162 107 ntBASIC7.28□□□□□ -1.24
SOX1O00570 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
SOX1O00570 SNORD65C-201ENST00000390962 71 ntBASIC7.28□□□□□ -1.24
SOX1O00570 AL096800.1-201ENST00000405326 893 ntBASIC7.28□□□□□ -1.24
SOX1O00570 RANP6-201ENST00000413691 644 ntBASIC7.28□□□□□ -1.24
SOX1O00570 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC7.28□□□□□ -1.24
SOX1O00570 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC7.28□□□□□ -1.24
SOX1O00570 MTND3P1-201ENST00000441336 220 ntBASIC7.28□□□□□ -1.24
SOX1O00570 AL163193.1-201ENST00000444895 788 ntBASIC7.28□□□□□ -1.24
SOX1O00570 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC7.28□□□□□ -1.24
SOX1O00570 HMGN1P36-201ENST00000446623 298 ntBASIC7.28□□□□□ -1.24
SOX1O00570 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
SOX1O00570 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7.28□□□□□ -1.24
SOX1O00570 RHEBP2-201ENST00000450289 600 ntBASIC7.28□□□□□ -1.24
SOX1O00570 PSPC1P2-201ENST00000455130 225 ntBASIC7.28□□□□□ -1.24
SOX1O00570 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC7.28□□□□□ -1.24
SOX1O00570 MTCO3P38-201ENST00000468910 766 ntBASIC7.28□□□□□ -1.24
SOX1O00570 AC093270.2-201ENST00000486157 792 ntBASIC7.28□□□□□ -1.24
SOX1O00570 GM2AP2-201ENST00000491764 562 ntBASIC7.28□□□□□ -1.24
SOX1O00570 AC018645.1-201ENST00000505003 109 ntBASIC7.28□□□□□ -1.24
SOX1O00570 SNX18P23-201ENST00000510867 677 ntBASIC7.28□□□□□ -1.24
SOX1O00570 RN7SKP141-201ENST00000516167 338 ntBASIC7.28□□□□□ -1.24
SOX1O00570 RNU6-405P-201ENST00000516637 110 ntBASIC7.28□□□□□ -1.24
SOX1O00570 RPL10P18-201ENST00000519384 309 ntBASIC7.28□□□□□ -1.24
SOX1O00570 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7.28□□□□□ -1.24
SOX1O00570 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC7.28□□□□□ -1.24
SOX1O00570 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC7.28□□□□□ -1.24
SOX1O00570 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC7.28□□□□□ -1.24
SOX1O00570 ADI1P3-201ENST00000549509 470 ntBASIC7.28□□□□□ -1.24
SOX1O00570 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC7.28□□□□□ -1.24
SOX1O00570 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC7.28□□□□□ -1.24
SOX1O00570 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC7.28□□□□□ -1.24
SOX1O00570 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
SOX1O00570 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC7.28□□□□□ -1.24
SOX1O00570 SYPL1P2-201ENST00000582878 727 ntBASIC7.28□□□□□ -1.24
SOX1O00570 AC090616.1-201ENST00000583895 447 ntBASIC7.28□□□□□ -1.24
SOX1O00570 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC7.28□□□□□ -1.24
SOX1O00570 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC7.28□□□□□ -1.24
SOX1O00570 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC7.28□□□□□ -1.24
SOX1O00570 U73023.1-201ENST00000603134 700 ntBASIC7.28□□□□□ -1.24
SOX1O00570 AC007684.1-201ENST00000609671 477 ntBASIC7.28□□□□□ -1.24
SOX1O00570 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC7.28□□□□□ -1.24
SOX1O00570 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
SOX1O00570 AC010435.1-201ENST00000623353 1177 ntBASIC7.28□□□□□ -1.24
SOX1O00570 AC073488.3-201ENST00000631611 778 ntBASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms