Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 AC090643.1-201ENST00000623600 3100 ntBASIC10.02□□□□□ -0.8
PHF8Q9UPP1 DUXAP8-204ENST00000447898 4136 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
PHF8Q9UPP1 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC10.02□□□□□ -0.8
PHF8Q9UPP1 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
PHF8Q9UPP1 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
PHF8Q9UPP1 Y_RNA.422-201ENST00000384054 114 ntBASIC10.02□□□□□ -0.81
PHF8Q9UPP1 RNU6-463P-201ENST00000384340 107 ntBASIC10.02□□□□□ -0.81
PHF8Q9UPP1 AC245036.1-201ENST00000391727 309 ntBASIC10.02□□□□□ -0.81
PHF8Q9UPP1 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC10.02□□□□□ -0.81
PHF8Q9UPP1 RPL7P44-201ENST00000424827 742 ntBASIC10.02□□□□□ -0.81
PHF8Q9UPP1 RPL3P11-201ENST00000434028 1146 ntBASIC10.02□□□□□ -0.81
PHF8Q9UPP1 HMGB1P16-201ENST00000447155 540 ntBASIC10.02□□□□□ -0.81
PHF8Q9UPP1 AL590369.1-201ENST00000455074 470 ntTSL 2 BASIC10.02□□□□□ -0.81
PHF8Q9UPP1 AC019084.1-201ENST00000457337 432 ntBASIC10.02□□□□□ -0.81
PHF8Q9UPP1 RN7SL168P-201ENST00000463821 279 ntBASIC10.02□□□□□ -0.81
PHF8Q9UPP1 AC110792.2-201ENST00000510278 224 ntBASIC10.02□□□□□ -0.81
PHF8Q9UPP1 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC10.02□□□□□ -0.81
PHF8Q9UPP1 RNA5SP473-201ENST00000516402 125 ntBASIC10.02□□□□□ -0.81
PHF8Q9UPP1 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC10.02□□□□□ -0.81
PHF8Q9UPP1 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC10.02□□□□□ -0.81
PHF8Q9UPP1 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC10.02□□□□□ -0.81
PHF8Q9UPP1 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
PHF8Q9UPP1 YWHABP2-201ENST00000540201 713 ntBASIC10.02□□□□□ -0.81
PHF8Q9UPP1 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC10.02□□□□□ -0.81
PHF8Q9UPP1 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC10.02□□□□□ -0.81
PHF8Q9UPP1 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC10.02□□□□□ -0.81
PHF8Q9UPP1 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC10.02□□□□□ -0.81
PHF8Q9UPP1 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC10.02□□□□□ -0.81
PHF8Q9UPP1 AL031658.2-201ENST00000616850 651 ntBASIC10.02□□□□□ -0.81
PHF8Q9UPP1 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC10.02□□□□□ -0.81
PHF8Q9UPP1 AF254983.1-201ENST00000612267 3336 ntTSL 5 BASIC10.02□□□□□ -0.81
PHF8Q9UPP1 MAPK6PS3-201ENST00000403865 2162 ntBASIC10.02□□□□□ -0.81
PHF8Q9UPP1 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
PHF8Q9UPP1 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
PHF8Q9UPP1 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
PHF8Q9UPP1 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 AC105342.1-201ENST00000378334 6848 ntBASIC10.01□□□□□ -0.81
PHF8Q9UPP1 SPRY1-202ENST00000394339 2504 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 AC036108.4-201ENST00000611654 2516 ntBASIC10.01□□□□□ -0.81
PHF8Q9UPP1 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 AC092162.3-201ENST00000624511 1624 ntBASIC10.01□□□□□ -0.81
PHF8Q9UPP1 TPP2-202ENST00000376065 3931 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 AL033519.1-201ENST00000407266 307 ntBASIC10.01□□□□□ -0.81
PHF8Q9UPP1 IL6-206ENST00000407492 926 ntTSL 3 BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 UBE2FP3-201ENST00000436366 524 ntBASIC10.01□□□□□ -0.81
PHF8Q9UPP1 LDHAP2-201ENST00000437325 985 ntBASIC10.01□□□□□ -0.81
PHF8Q9UPP1 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 AL590639.1-201ENST00000456484 337 ntBASIC10.01□□□□□ -0.81
PHF8Q9UPP1 AC090013.1-201ENST00000485147 480 ntBASIC10.01□□□□□ -0.81
PHF8Q9UPP1 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 SRP72-202ENST00000504757 745 ntTSL 2 BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 DCAF13P2-201ENST00000514188 555 ntBASIC10.01□□□□□ -0.81
PHF8Q9UPP1 RN7SKP233-201ENST00000517005 110 ntBASIC10.01□□□□□ -0.81
PHF8Q9UPP1 AC116917.1-201ENST00000520558 305 ntBASIC10.01□□□□□ -0.81
PHF8Q9UPP1 HSPA8P13-201ENST00000523715 472 ntBASIC10.01□□□□□ -0.81
PHF8Q9UPP1 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 OR4A7P-201ENST00000531463 910 ntBASIC10.01□□□□□ -0.81
PHF8Q9UPP1 OR5F2P-201ENST00000532761 941 ntBASIC10.01□□□□□ -0.81
PHF8Q9UPP1 AL512310.1-201ENST00000548639 172 ntBASIC10.01□□□□□ -0.81
PHF8Q9UPP1 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 AC104581.3-201ENST00000573621 348 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 AC036176.3-201ENST00000602456 418 ntBASIC10.01□□□□□ -0.81
PHF8Q9UPP1 SNX29P2-204ENST00000603801 875 ntBASIC10.01□□□□□ -0.81
PHF8Q9UPP1 AL161420.1-201ENST00000619393 264 ntBASIC10.01□□□□□ -0.81
PHF8Q9UPP1 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 GTF2H1-201ENST00000265963 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 AP003471.1-202ENST00000319051 1988 ntBASIC10.01□□□□□ -0.81
PHF8Q9UPP1 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 EEF1A1P26-201ENST00000458319 1363 ntBASIC10.01□□□□□ -0.81
PHF8Q9UPP1 C10orf25-201ENST00000625168 3078 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
PHF8Q9UPP1 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
PHF8Q9UPP1 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC10□□□□□ -0.81
PHF8Q9UPP1 AASS-203ENST00000417368 3163 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
PHF8Q9UPP1 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC10□□□□□ -0.81
PHF8Q9UPP1 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC10□□□□□ -0.81
PHF8Q9UPP1 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC10□□□□□ -0.81
PHF8Q9UPP1 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC10□□□□□ -0.81
PHF8Q9UPP1 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms