Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 RNA5SP392-201ENST00000516905 112 ntBASIC5.56□□□□□ -1.52
CHD7Q9P2D1 AL109766.1-201ENST00000555080 552 ntBASIC5.56□□□□□ -1.52
CHD7Q9P2D1 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
CHD7Q9P2D1 AC006600.2-201ENST00000624834 2506 ntBASIC5.56□□□□□ -1.52
CHD7Q9P2D1 RNU2-50P-201ENST00000410494 143 ntBASIC5.55□□□□□ -1.52
CHD7Q9P2D1 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 MIR4715-201ENST00000584117 79 ntBASIC5.55□□□□□ -1.52
CHD7Q9P2D1 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 MAPK10-270ENST00000641102 3538 ntBASIC5.55□□□□□ -1.52
CHD7Q9P2D1 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 SPATA13-201ENST00000343003 6405 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 IQCB2P-201ENST00000401788 1633 ntBASIC5.55□□□□□ -1.52
CHD7Q9P2D1 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 SAMM50P1-201ENST00000455403 1399 ntBASIC5.55□□□□□ -1.52
CHD7Q9P2D1 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 SPTAN1-203ENST00000372739 7868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 EIF2S2P2-201ENST00000447161 982 ntBASIC5.55□□□□□ -1.52
CHD7Q9P2D1 RPL21P129-201ENST00000491732 478 ntBASIC5.55□□□□□ -1.52
CHD7Q9P2D1 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 RN7SKP122-201ENST00000515923 296 ntBASIC5.55□□□□□ -1.52
CHD7Q9P2D1 RN7SKP92-201ENST00000517266 244 ntBASIC5.55□□□□□ -1.52
CHD7Q9P2D1 BNIP3P5-201ENST00000562290 498 ntBASIC5.55□□□□□ -1.52
CHD7Q9P2D1 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 SPATA31D4-201ENST00000419782 4787 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 LTBP1-204ENST00000407925 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 CMKLR1-202ENST00000412676 5110 ntAPPRIS ALT2 TSL 3 BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 RNU1-136P-201ENST00000384181 164 ntBASIC5.55□□□□□ -1.52
CHD7Q9P2D1 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 SCARNA20.4-201ENST00000516969 131 ntBASIC5.55□□□□□ -1.52
CHD7Q9P2D1 OR4A17P-201ENST00000526032 904 ntBASIC5.55□□□□□ -1.52
CHD7Q9P2D1 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 GLRXP2-201ENST00000555594 321 ntBASIC5.55□□□□□ -1.52
CHD7Q9P2D1 AC069366.1-201ENST00000583159 838 ntBASIC5.55□□□□□ -1.52
CHD7Q9P2D1 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CHD7Q9P2D1 NHS-204ENST00000615422 8860 ntTSL 5 BASIC5.54□□□□□ -1.52
CHD7Q9P2D1 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.54□□□□□ -1.52
CHD7Q9P2D1 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHD7Q9P2D1 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CHD7Q9P2D1 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHD7Q9P2D1 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHD7Q9P2D1 OR9G4-201ENST00000302957 984 ntBASIC5.54□□□□□ -1.52
CHD7Q9P2D1 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CHD7Q9P2D1 SNORA37-201ENST00000384504 129 ntBASIC5.54□□□□□ -1.52
CHD7Q9P2D1 SNORA57.1-201ENST00000391227 145 ntBASIC5.54□□□□□ -1.52
CHD7Q9P2D1 AC004074.1-201ENST00000421810 1063 ntBASIC5.54□□□□□ -1.52
CHD7Q9P2D1 RPS4XP16-201ENST00000427198 791 ntBASIC5.54□□□□□ -1.52
CHD7Q9P2D1 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.54□□□□□ -1.52
CHD7Q9P2D1 AC011742.2-201ENST00000443818 352 ntBASIC5.54□□□□□ -1.52
CHD7Q9P2D1 ATP5LP5-201ENST00000483050 299 ntBASIC5.54□□□□□ -1.52
CHD7Q9P2D1 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.54□□□□□ -1.52
CHD7Q9P2D1 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.54□□□□□ -1.52
CHD7Q9P2D1 AL020997.2-201ENST00000602607 184 ntBASIC5.54□□□□□ -1.52
CHD7Q9P2D1 AP005131.7-201ENST00000610087 611 ntBASIC5.54□□□□□ -1.52
CHD7Q9P2D1 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHD7Q9P2D1 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CHD7Q9P2D1 OTUD7B-202ENST00000581312 8872 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHD7Q9P2D1 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
CHD7Q9P2D1 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHD7Q9P2D1 MIR134-201ENST00000385258 73 ntBASIC5.54□□□□□ -1.52
CHD7Q9P2D1 CYP4F29P-201ENST00000420685 446 ntBASIC5.54□□□□□ -1.52
CHD7Q9P2D1 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms