Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC089984.3-201ENST00000552838 363 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 ACTR3BP3-201ENST00000565577 979 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 PPIAP14-201ENST00000577627 496 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 MIR378C-201ENST00000578683 81 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 MIR5095-201ENST00000578844 88 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 VN1R88P-201ENST00000596787 292 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 AC073648.5-201ENST00000603502 305 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 AC016877.3-201ENST00000606778 504 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 AC025588.4-201ENST00000615802 908 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 AC007494.3-201ENST00000624660 743 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 CCAT2-201ENST00000630920 1752 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 AC105114.1-201ENST00000624795 1862 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6□□□□□ -1.45
SEC61A2Q9H9S3 AL139384.2-201ENST00000613809 3590 ntBASIC6□□□□□ -1.45
SEC61A2Q9H9S3 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AC095038.1-201ENST00000429248 1591 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 RN7SKP118-201ENST00000364331 330 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 RNU6-304P-201ENST00000364855 107 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 RN7SKP189-201ENST00000365042 330 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 RNU5A-2P-201ENST00000384337 116 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AL136100.1-201ENST00000407696 330 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 ELOCP17-201ENST00000414751 326 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 MTND1P23-201ENST00000416931 372 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 GLUD1P9-201ENST00000420997 1173 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 GTF2IP2-201ENST00000424290 697 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 MOB1AP1-201ENST00000430903 535 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 OR6R1P-201ENST00000431838 940 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 RPS27P5-201ENST00000444247 244 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AL845321.1-201ENST00000444603 348 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AP000936.2-201ENST00000447151 681 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 RN7SKP198-201ENST00000459286 306 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 RN7SL654P-201ENST00000479178 292 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AC139713.1-202ENST00000512366 460 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AC020937.1-201ENST00000519677 1013 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AC060788.1-201ENST00000521318 469 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AC103968.1-201ENST00000557841 573 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AC090888.3-201ENST00000558917 509 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AC090695.1-201ENST00000561269 1222 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AC010287.1-201ENST00000566916 357 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 CBX3P2-202ENST00000583365 535 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 RSL24D1P11-201ENST00000591045 491 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AL049840.6-201ENST00000604583 345 ntBASIC5.99□□□□□ -1.45
SEC61A2Q9H9S3 AC010738.1-201ENST00000604970 987 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms