Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 KARSP2-201ENST00000415696 1639 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AHSP-201ENST00000302312 524 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 TMSB4XP2-201ENST00000335179 210 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 RNU6-374P-201ENST00000364146 108 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 RNU6-1011P-201ENST00000384668 107 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 RNU6-244P-201ENST00000391028 104 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 ISY1-202ENST00000393292 988 ntTSL 5 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 CYCSP45-201ENST00000402289 315 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 MIR1204-201ENST00000408388 67 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AC009413.1-201ENST00000414823 399 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AL590806.1-201ENST00000415818 853 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 RPL31P54-201ENST00000429803 370 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 HMGB1P31-201ENST00000437242 427 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AL512286.1-201ENST00000439244 400 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AC004865.1-201ENST00000442276 1003 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 TPT1P14-201ENST00000448018 505 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 MTCO1P48-201ENST00000448024 1096 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 BZW1P1-201ENST00000454901 1240 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 OR7E62P-201ENST00000456741 477 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 RPS4XP12-201ENST00000461747 709 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 RN7SL251P-201ENST00000464175 297 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 UBTFL6-201ENST00000477929 1024 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AC079080.1-201ENST00000479841 822 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 ACTG1P13-201ENST00000486987 1043 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 GAPDHP38-201ENST00000503632 1002 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AC015801.1-201ENST00000585651 153 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AL390838.2-201ENST00000602394 274 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AC012065.4-201ENST00000602445 679 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AL390058.1-201ENST00000603834 629 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 SEPT7P9-203ENST00000604116 343 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AC006335.3-201ENST00000613408 292 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AL353898.2-201ENST00000623000 255 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 AL034408.1-201ENST00000637712 664 ntBASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
BHLHE41Q9C0J9 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 MTCO1P23-201ENST00000415223 1526 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 CDY7P-201ENST00000429883 1604 ntBASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
BHLHE41Q9C0J9 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms