Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC084373.1-201ENST00000603311 235 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 RNU4-5P-201ENST00000607255 135 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 AC005021.1-201ENST00000608730 355 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 AC015922.4-201ENST00000612568 690 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 AC073592.6-201ENST00000624271 415 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 AC083865.1-201ENST00000636634 831 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 AC008691.1-209ENST00000642094 814 ntBASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
AMBRA1Q9C0C7 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 MFSD8-220ENST00000641243 1422 ntBASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 RNU6-207P-201ENST00000384137 107 ntBASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 SNORA7A-201ENST00000384765 139 ntBASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 MIR433-201ENST00000384837 93 ntBASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AL157884.1-201ENST00000424561 454 ntBASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AC016027.5-201ENST00000427227 210 ntBASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 MTND5P25-201ENST00000430499 799 ntBASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 BX119904.1-201ENST00000432026 348 ntBASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 MED6P1-201ENST00000439659 713 ntBASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AC245047.2-201ENST00000441060 530 ntBASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AC007383.1-201ENST00000445875 636 ntBASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 VPS25P1-201ENST00000455691 508 ntBASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 TPT1P3-201ENST00000492841 512 ntBASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 RPL5P23-201ENST00000496040 868 ntBASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AC090058.1-201ENST00000498788 435 ntBASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AC092718.4-201ENST00000566639 716 ntBASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 RN7SL230P-201ENST00000580835 303 ntBASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 RN7SL753P-201ENST00000581238 290 ntBASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AC012175.1-201ENST00000603755 531 ntBASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 NDUFB9P1-201ENST00000604683 510 ntBASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AC006386.1-201ENST00000619436 415 ntBASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AC069234.4-201ENST00000621276 412 ntBASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AP001962.1-201ENST00000624114 559 ntBASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AP001052.1-201ENST00000626421 99 ntBASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AC017104.5-201ENST00000637647 639 ntBASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AC116667.2-201ENST00000641075 823 ntBASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AC096921.2-201ENST00000561507 1916 ntBASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 AL731532.1-201ENST00000623972 4236 ntBASIC5.85□□□□□ -1.47
AMBRA1Q9C0C7 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 AL359955.1-201ENST00000455242 3275 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 CR382285.2-201ENST00000624662 1495 ntBASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.84□□□□□ -1.47
AMBRA1Q9C0C7 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms