Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 TRNT1-202ENST00000280591 2180 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 EIF2B2-201ENST00000266126 4314 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 RIPOR3-201ENST00000045083 4279 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 C1orf147-201ENST00000367119 2096 ntTSL 2 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 FCRLA-214ENST00000546024 2077 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 PTGER4-201ENST00000302472 3848 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 PELI1-201ENST00000358912 3750 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 CLEC4M-201ENST00000248228 1865 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 PRAMEF4-201ENST00000235349 1828 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 MAMDC2-201ENST00000377182 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 AGBL2-203ENST00000525123 3577 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 RASGRP1-206ENST00000558164 1757 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 KCNMB1-202ENST00000521859 1733 ntTSL 2 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 RIT1-202ENST00000368323 3445 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 AL390728.2-201ENST00000400933 1670 ntBASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 TTC23-201ENST00000262074 3316 ntTSL 5 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 GRAMD2A-201ENST00000309731 3281 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 ARMC3-202ENST00000376528 3258 ntTSL 2 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 GPATCH2-201ENST00000366934 3218 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 MAX-202ENST00000284165 3155 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 LRIT2-202ENST00000538192 3177 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 PHC1P1-201ENST00000554937 3061 ntBASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 ZWINT-201ENST00000318387 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 BTN3A2-204ENST00000396948 1494 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 ITIH1-201ENST00000273283 2911 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 GSG1-202ENST00000351606 1422 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 PAMR1-208ENST00000621476 2842 ntTSL 2 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 TUBA1A-207ENST00000550767 1384 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 SLC4A1-202ENST00000399246 3855 ntTSL 5 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 MTA2-202ENST00000524902 2577 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 CDA-201ENST00000375071 963 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 KRT41P-201ENST00000393988 1293 ntBASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 ANO7-203ENST00000402530 894 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 MIR1278-201ENST00000408753 81 ntBASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 AL691449.1-201ENST00000426570 421 ntBASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 AC005838.1-201ENST00000430712 233 ntBASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 FTH1P6-201ENST00000430768 320 ntBASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 IDI2-AS1-203ENST00000434470 435 ntTSL 3 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 LINC00106-202ENST00000434938 356 ntTSL 5 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 AF228730.3-201ENST00000436691 102 ntBASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 PIN1P1-202ENST00000439639 301 ntBASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 AC253536.4-201ENST00000440539 267 ntBASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 FXYD6P2-201ENST00000444174 288 ntBASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 BX284656.1-201ENST00000446364 668 ntTSL 3 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 AC125388.1-201ENST00000459631 156 ntBASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 RN7SL452P-201ENST00000482923 291 ntBASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 RPL13AP3-201ENST00000487479 614 ntBASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 AP000851.1-201ENST00000544115 743 ntTSL 3 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 AC021818.1-201ENST00000561316 547 ntTSL 5 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 MPI-212ENST00000565576 1148 ntTSL 2 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 DNM1P50-201ENST00000565767 508 ntBASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 AL353997.3-201ENST00000586597 589 ntBASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 AFMID-208ENST00000588800 647 ntTSL 2 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 AC021594.2-201ENST00000592499 527 ntTSL 3 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 AC005191.1-201ENST00000603950 358 ntBASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 5S_rRNA.11-201ENST00000618635 84 ntBASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 AL359741.1-201ENST00000621262 225 ntBASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 PGM2-206ENST00000625312 661 ntTSL 2 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 ABHD11-AS1-202ENST00000641969 358 ntBASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 SRSF7-201ENST00000313117 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 STK38-201ENST00000229812 3576 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 GGA3-213ENST00000582486 2319 ntTSL 5 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 ZNF133-214ENST00000628216 2318 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 TCOF1-203ENST00000394269 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 AGGF1-201ENST00000312916 4509 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 GATD1-201ENST00000319863 4357 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 ESR1-201ENST00000206249 6458 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 NETO2-201ENST00000303155 3241 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 AASS-202ENST00000393376 3233 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 PLA2G2C-202ENST00000429261 3249 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 ALDH1L1-201ENST00000273450 3179 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 ZNF319-201ENST00000299237 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 ZNF814-213ENST00000597832 2090 ntTSL 2 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 TSPYL6-201ENST00000317802 3089 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 PSME3-205ENST00000545225 3082 ntTSL 2 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 ZC3HC1-201ENST00000311873 2017 ntTSL 2 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 OXNAD1-209ENST00000627468 3983 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
KRTAP3-3Q9BYR6 GRIK3-202ENST00000373093 2955 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms