Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC129915.3-201ENST00000634128 948 ntBASIC5.13□□□□□ -1.59
RSPO3Q9BXY4 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.13□□□□□ -1.59
RSPO3Q9BXY4 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.13□□□□□ -1.59
RSPO3Q9BXY4 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.13□□□□□ -1.59
RSPO3Q9BXY4 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RSPO3Q9BXY4 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RSPO3Q9BXY4 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.13□□□□□ -1.59
RSPO3Q9BXY4 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RSPO3Q9BXY4 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RSPO3Q9BXY4 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
RSPO3Q9BXY4 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
RSPO3Q9BXY4 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RSPO3Q9BXY4 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 HMGB1P20-201ENST00000402555 677 ntBASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 PPIAP9-201ENST00000403866 498 ntBASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 AC245060.4-201ENST00000413293 1121 ntBASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 DNAJA1P5-201ENST00000440278 943 ntBASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 AC073465.2-201ENST00000440938 498 ntBASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 AP000547.1-201ENST00000454360 617 ntBASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 AC084754.1-201ENST00000463466 464 ntBASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 ATP5LP5-201ENST00000483050 299 ntBASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 HMGB1P42-201ENST00000532126 553 ntBASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 OR4A43P-201ENST00000532938 908 ntBASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 OR8G3P-201ENST00000533406 921 ntBASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 AC119501.1-201ENST00000603646 475 ntBASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 AC108738.1-201ENST00000603703 237 ntBASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 AC241377.1-201ENST00000619797 406 ntBASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 AC079097.1-201ENST00000512187 1399 ntBASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 AL121839.2-201ENST00000565058 6943 ntBASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RSPO3Q9BXY4 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 AL162456.1-201ENST00000634535 2006 ntBASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 AL009179.1-201ENST00000406085 265 ntBASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 GABARAPL3-201ENST00000412799 354 ntBASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 AC009506.2-201ENST00000420635 840 ntBASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 RIMKLBP2-201ENST00000424737 654 ntBASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 RPL7P56-201ENST00000429441 717 ntBASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 SUMO2P3-201ENST00000438311 288 ntBASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 AP006222.1-205ENST00000450734 457 ntBASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 NXT1P1-201ENST00000458481 316 ntBASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 SCARNA21.2-201ENST00000516600 166 ntBASIC5.11□□□□□ -1.59
RSPO3Q9BXY4 SCARNA20.4-201ENST00000516969 131 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms