Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC7.14□□□□□ -1.27
CHAMP1Q96JM3 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC7.14□□□□□ -1.27
CHAMP1Q96JM3 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.14□□□□□ -1.27
CHAMP1Q96JM3 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC7.14□□□□□ -1.27
CHAMP1Q96JM3 STK3-216ENST00000523601 3107 ntTSL 2 BASIC7.14□□□□□ -1.27
CHAMP1Q96JM3 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC7.14□□□□□ -1.27
CHAMP1Q96JM3 NOP56P3-201ENST00000549457 385 ntBASIC7.14□□□□□ -1.27
CHAMP1Q96JM3 DPPA3P2-201ENST00000553589 478 ntBASIC7.14□□□□□ -1.27
CHAMP1Q96JM3 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC7.14□□□□□ -1.27
CHAMP1Q96JM3 HNRNPCP1-201ENST00000556181 766 ntBASIC7.14□□□□□ -1.27
CHAMP1Q96JM3 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
CHAMP1Q96JM3 MTCYBP28-201ENST00000566728 1132 ntBASIC7.14□□□□□ -1.27
CHAMP1Q96JM3 MIR3157-201ENST00000578688 85 ntBASIC7.14□□□□□ -1.27
CHAMP1Q96JM3 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.14□□□□□ -1.27
CHAMP1Q96JM3 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7.14□□□□□ -1.27
CHAMP1Q96JM3 AC002487.1-201ENST00000604565 994 ntBASIC7.14□□□□□ -1.27
CHAMP1Q96JM3 AC017002.4-201ENST00000604721 1525 ntBASIC7.14□□□□□ -1.27
CHAMP1Q96JM3 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.14□□□□□ -1.27
CHAMP1Q96JM3 AC097641.3-201ENST00000613523 464 ntBASIC7.14□□□□□ -1.27
CHAMP1Q96JM3 uc_338.29-201ENST00000615099 168 ntBASIC7.14□□□□□ -1.27
CHAMP1Q96JM3 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC7.14□□□□□ -1.27
CHAMP1Q96JM3 MIR7159-201ENST00000620587 66 ntBASIC7.14□□□□□ -1.27
CHAMP1Q96JM3 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC7.14□□□□□ -1.27
CHAMP1Q96JM3 AC139792.2-201ENST00000624218 587 ntBASIC7.14□□□□□ -1.27
CHAMP1Q96JM3 OR7E91P-202ENST00000642062 1198 ntBASIC7.14□□□□□ -1.27
CHAMP1Q96JM3 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC7.14□□□□□ -1.27
CHAMP1Q96JM3 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
CHAMP1Q96JM3 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
CHAMP1Q96JM3 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC7.14□□□□□ -1.27
CHAMP1Q96JM3 MARK2P4-201ENST00000503381 2380 ntBASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 EIF3EP1-201ENST00000433978 1316 ntBASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 SNORA51.1-201ENST00000363243 140 ntBASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 RNA5-8SP5-201ENST00000365304 152 ntBASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 HMGB3P19-201ENST00000403971 560 ntBASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 OR2W4P-201ENST00000406496 926 ntBASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 RANP4-201ENST00000413361 655 ntBASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 BRWD1P3-201ENST00000428816 390 ntBASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 PSMD10P2-201ENST00000432890 672 ntBASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 RPS3AP38-201ENST00000435889 763 ntBASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 SOCS5P1-201ENST00000440415 949 ntBASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 MTCO1P53-201ENST00000441633 699 ntBASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 AL512593.1-201ENST00000444758 779 ntBASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 GAPDHP23-201ENST00000444823 993 ntBASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 HMGN1P2-201ENST00000445197 310 ntBASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 LRRC37A14P-201ENST00000452297 462 ntBASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 AL133351.3-201ENST00000454998 193 ntBASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 RPL21P18-201ENST00000469899 480 ntBASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 RPS27P20-201ENST00000492051 246 ntBASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 AC015864.1-201ENST00000496512 544 ntBASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 RNU6-311P-201ENST00000516224 102 ntBASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 RNA5SP318-201ENST00000516352 92 ntBASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 AC091163.3-201ENST00000518269 1144 ntBASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 HMGB1P46-201ENST00000520062 610 ntBASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 AC008429.4-201ENST00000521201 182 ntBASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 RPA2P3-201ENST00000533268 770 ntBASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 AC231759.1-201ENST00000616455 597 ntBASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 AC026124.2-201ENST00000621847 656 ntBASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 AC004943.3-201ENST00000624116 600 ntBASIC7.13□□□□□ -1.27
CHAMP1Q96JM3 DRG1-207ENST00000629688 309 ntTSL 5 BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms