Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AP000350.7-201ENST00000624923 8030 ntBASIC4.33□□□□□ -1.72
VPS13CQ709C8 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.33□□□□□ -1.72
VPS13CQ709C8 DISP1-201ENST00000284476 4762 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS13CQ709C8 FTH1P10-202ENST00000430907 550 ntBASIC4.33□□□□□ -1.72
VPS13CQ709C8 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS13CQ709C8 RPL7AP52-201ENST00000458096 790 ntBASIC4.33□□□□□ -1.72
VPS13CQ709C8 SLC25A51P1-201ENST00000468432 871 ntBASIC4.33□□□□□ -1.72
VPS13CQ709C8 RNA5SP43-201ENST00000516559 110 ntBASIC4.33□□□□□ -1.72
VPS13CQ709C8 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS13CQ709C8 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS13CQ709C8 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VPS13CQ709C8 AC011487.3-201ENST00000593607 453 ntBASIC4.33□□□□□ -1.72
VPS13CQ709C8 AC067959.1-201ENST00000604334 379 ntBASIC4.33□□□□□ -1.72
VPS13CQ709C8 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC4.33□□□□□ -1.72
VPS13CQ709C8 UNC79-205ENST00000555664 8484 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
VPS13CQ709C8 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS13CQ709C8 GABRA1-202ENST00000393943 4686 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS13CQ709C8 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
VPS13CQ709C8 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS13CQ709C8 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS13CQ709C8 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
VPS13CQ709C8 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VPS13CQ709C8 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS13CQ709C8 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS13CQ709C8 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS13CQ709C8 OR4K15-201ENST00000305051 1216 ntBASIC4.33□□□□□ -1.72
VPS13CQ709C8 SNORA37-201ENST00000384504 129 ntBASIC4.33□□□□□ -1.72
VPS13CQ709C8 ATG4AP1-201ENST00000416893 538 ntBASIC4.33□□□□□ -1.72
VPS13CQ709C8 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS13CQ709C8 RPS29P10-201ENST00000439197 166 ntBASIC4.33□□□□□ -1.72
VPS13CQ709C8 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VPS13CQ709C8 SOX5P1-201ENST00000524155 1127 ntBASIC4.33□□□□□ -1.72
VPS13CQ709C8 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
VPS13CQ709C8 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS13CQ709C8 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS13CQ709C8 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VPS13CQ709C8 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC4.33□□□□□ -1.72
VPS13CQ709C8 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
VPS13CQ709C8 CENPC-201ENST00000273853 6940 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS13CQ709C8 ABCA8-203ENST00000430352 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS13CQ709C8 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
VPS13CQ709C8 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VPS13CQ709C8 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS13CQ709C8 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS13CQ709C8 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC4.33□□□□□ -1.72
VPS13CQ709C8 TULP4-202ENST00000367097 11295 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS13CQ709C8 RSU1P3-201ENST00000412878 835 ntBASIC4.33□□□□□ -1.72
VPS13CQ709C8 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS13CQ709C8 AC239367.2-201ENST00000447309 705 ntBASIC4.33□□□□□ -1.72
VPS13CQ709C8 AC091912.1-201ENST00000511351 248 ntBASIC4.33□□□□□ -1.72
VPS13CQ709C8 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VPS13CQ709C8 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VPS13CQ709C8 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC4.33□□□□□ -1.72
VPS13CQ709C8 AC091932.2-201ENST00000623014 291 ntBASIC4.33□□□□□ -1.72
VPS13CQ709C8 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.33□□□□□ -1.72
VPS13CQ709C8 PLEKHA5-213ENST00000538714 6487 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS13CQ709C8 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS13CQ709C8 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS13CQ709C8 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS13CQ709C8 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS13CQ709C8 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
VPS13CQ709C8 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
VPS13CQ709C8 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VPS13CQ709C8 ZNF556-201ENST00000307635 6574 ntAPPRIS P3 TSL 2 BASIC4.32□□□□□ -1.72
VPS13CQ709C8 SCN10A-201ENST00000449082 6418 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VPS13CQ709C8 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VPS13CQ709C8 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VPS13CQ709C8 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS13CQ709C8 AC073072.2-201ENST00000447425 348 ntBASIC4.32□□□□□ -1.72
VPS13CQ709C8 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS13CQ709C8 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS13CQ709C8 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS13CQ709C8 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS13CQ709C8 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VPS13CQ709C8 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
VPS13CQ709C8 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VPS13CQ709C8 ELP4-218ENST00000639570 5795 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS13CQ709C8 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
VPS13CQ709C8 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
VPS13CQ709C8 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS13CQ709C8 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS13CQ709C8 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VPS13CQ709C8 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VPS13CQ709C8 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS13CQ709C8 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS13CQ709C8 SNORA11F-201ENST00000408237 128 ntBASIC4.32□□□□□ -1.72
VPS13CQ709C8 AC090058.1-201ENST00000498788 435 ntBASIC4.32□□□□□ -1.72
VPS13CQ709C8 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS13CQ709C8 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS13CQ709C8 HIRAP1-201ENST00000605318 787 ntBASIC4.32□□□□□ -1.72
VPS13CQ709C8 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS13CQ709C8 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VPS13CQ709C8 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
VPS13CQ709C8 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS13CQ709C8 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS13CQ709C8 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.32□□□□□ -1.72
VPS13CQ709C8 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS13CQ709C8 CCT8P1-201ENST00000413611 1657 ntBASIC4.32□□□□□ -1.72
VPS13CQ709C8 AL132640.2-201ENST00000559968 1698 ntBASIC4.32□□□□□ -1.72
VPS13CQ709C8 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms