Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 CASC19-228ENST00000641414 1684 ntBASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 COX6B1P3-201ENST00000312310 260 ntBASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 RNA5SP498-201ENST00000411342 120 ntBASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 AC116036.1-201ENST00000412199 367 ntBASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 TMA16P2-201ENST00000413187 601 ntBASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 EMC3-AS1-205ENST00000438698 534 ntBASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 AC097499.1-201ENST00000444277 208 ntBASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 AL096803.2-201ENST00000450032 677 ntBASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 AC009963.3-201ENST00000458090 486 ntBASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 AC023245.1-201ENST00000468501 517 ntBASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 RPL23AP64-201ENST00000469465 435 ntBASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 RN7SL165P-201ENST00000477476 291 ntBASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 SNX18P24-201ENST00000505249 671 ntBASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 RNU6-276P-201ENST00000516114 96 ntBASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 RNA5SP206-201ENST00000516703 121 ntBASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 HIGD1AP18-201ENST00000520730 278 ntBASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 FAU-203ENST00000525297 355 ntTSL 5 BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 MED21-206ENST00000546323 575 ntTSL 3 BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 MTCO2P2-201ENST00000591258 225 ntBASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 AL022067.1-201ENST00000602426 454 ntBASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 MIR6729-201ENST00000618194 65 ntBASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 AL109659.3-201ENST00000624985 950 ntBASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 OR8G3P-202ENST00000641572 1255 ntBASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 MTCO1P18-201ENST00000455518 1419 ntBASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 LCOR-201ENST00000286067 4542 ntBASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.32□□□□□ -1.24
CCDC144BQ3MJ40 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 MIR142-201ENST00000384835 87 ntBASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 AC094019.1-201ENST00000434678 472 ntBASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 ARAFP2-201ENST00000440565 559 ntBASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 AL645936.1-201ENST00000441979 518 ntBASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 Z95152.1-201ENST00000453556 656 ntBASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 AC091544.1-201ENST00000484702 348 ntBASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 RPL12P30-201ENST00000488389 499 ntBASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 AC026414.1-201ENST00000504046 698 ntBASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 GAPDHP71-201ENST00000511530 1003 ntBASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 RN7SKP35-201ENST00000517210 151 ntBASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 AP005639.1-201ENST00000526939 192 ntBASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 AC036111.2-201ENST00000533247 901 ntBASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 AL121579.2-201ENST00000555466 590 ntBASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 RN7SL475P-201ENST00000583379 298 ntBASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 AC067773.1-201ENST00000603284 1094 ntBASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 AL356986.1-201ENST00000604085 341 ntBASIC7.31□□□□□ -1.24
CCDC144BQ3MJ40 AC073046.2-201ENST00000604756 527 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms