Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CACNA1BQ00975 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CACNA1BQ00975 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CACNA1BQ00975 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 AC079741.1-201ENST00000321498 212 ntBASIC5.36□□□□□ -1.55
CACNA1BQ00975 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 AL390774.1-201ENST00000411924 246 ntBASIC5.36□□□□□ -1.55
CACNA1BQ00975 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 AC009120.1-201ENST00000493458 473 ntBASIC5.36□□□□□ -1.55
CACNA1BQ00975 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CACNA1BQ00975 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 MIR4444-1-201ENST00000581696 74 ntBASIC5.36□□□□□ -1.55
CACNA1BQ00975 MIR4444-2-201ENST00000584390 74 ntBASIC5.36□□□□□ -1.55
CACNA1BQ00975 AC245389.1-201ENST00000605141 529 ntBASIC5.36□□□□□ -1.55
CACNA1BQ00975 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CACNA1BQ00975 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CACNA1BQ00975 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CACNA1BQ00975 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CACNA1BQ00975 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CACNA1BQ00975 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 snoU13.24-201ENST00000458998 104 ntBASIC5.36□□□□□ -1.55
CACNA1BQ00975 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 AC092375.1-201ENST00000550410 637 ntBASIC5.36□□□□□ -1.55
CACNA1BQ00975 AC093227.2-201ENST00000589357 285 ntBASIC5.36□□□□□ -1.55
CACNA1BQ00975 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CACNA1BQ00975 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CACNA1BQ00975 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CACNA1BQ00975 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CACNA1BQ00975 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CACNA1BQ00975 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CACNA1BQ00975 AC032011.1-201ENST00000611703 1549 ntBASIC5.36□□□□□ -1.55
CACNA1BQ00975 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.35□□□□□ -1.55
CACNA1BQ00975 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC5.35□□□□□ -1.55
CACNA1BQ00975 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC5.35□□□□□ -1.55
CACNA1BQ00975 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
CACNA1BQ00975 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CACNA1BQ00975 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CACNA1BQ00975 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC5.35□□□□□ -1.55
CACNA1BQ00975 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CACNA1BQ00975 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CACNA1BQ00975 RPL32P23-201ENST00000397237 405 ntBASIC5.35□□□□□ -1.55
CACNA1BQ00975 RNU2-50P-201ENST00000410494 143 ntBASIC5.35□□□□□ -1.55
CACNA1BQ00975 AC119751.6-201ENST00000416712 186 ntBASIC5.35□□□□□ -1.55
CACNA1BQ00975 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.35□□□□□ -1.55
CACNA1BQ00975 CHIAP3-201ENST00000423668 1133 ntBASIC5.35□□□□□ -1.55
CACNA1BQ00975 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.35□□□□□ -1.55
CACNA1BQ00975 AL450023.1-201ENST00000450868 751 ntBASIC5.35□□□□□ -1.55
CACNA1BQ00975 AC117395.1-201ENST00000487390 403 ntBASIC5.35□□□□□ -1.55
CACNA1BQ00975 AC021006.3-201ENST00000530771 192 ntBASIC5.35□□□□□ -1.55
CACNA1BQ00975 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.35□□□□□ -1.55
CACNA1BQ00975 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.35□□□□□ -1.55
CACNA1BQ00975 AL034374.2-201ENST00000605281 548 ntBASIC5.35□□□□□ -1.55
CACNA1BQ00975 AC141002.1-201ENST00000607025 279 ntBASIC5.35□□□□□ -1.55
CACNA1BQ00975 AC024941.1-201ENST00000612250 334 ntBASIC5.35□□□□□ -1.55
CACNA1BQ00975 AL390318.1-201ENST00000624564 687 ntBASIC5.35□□□□□ -1.55
CACNA1BQ00975 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CACNA1BQ00975 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CACNA1BQ00975 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CACNA1BQ00975 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
CACNA1BQ00975 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CACNA1BQ00975 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CACNA1BQ00975 MFSD8-216ENST00000641147 4009 ntBASIC5.35□□□□□ -1.55
CACNA1BQ00975 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CACNA1BQ00975 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CACNA1BQ00975 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.35□□□□□ -1.55
CACNA1BQ00975 RPL23AP18-201ENST00000416139 468 ntBASIC5.35□□□□□ -1.55
CACNA1BQ00975 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.35□□□□□ -1.55
CACNA1BQ00975 AC091390.2-201ENST00000432573 374 ntBASIC5.35□□□□□ -1.55
CACNA1BQ00975 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.35□□□□□ -1.55
CACNA1BQ00975 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC5.35□□□□□ -1.55
CACNA1BQ00975 OR7E158P-201ENST00000524483 910 ntBASIC5.35□□□□□ -1.55
CACNA1BQ00975 AC125494.2-201ENST00000602431 657 ntBASIC5.35□□□□□ -1.55
CACNA1BQ00975 AC069307.1-201ENST00000602820 447 ntBASIC5.35□□□□□ -1.55
CACNA1BQ00975 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms