Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
H3F3AP84243 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.06□□□□□ -1.6
H3F3AP84243 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
H3F3AP84243 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
H3F3AP84243 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
H3F3AP84243 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
H3F3AP84243 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
H3F3AP84243 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
H3F3AP84243 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
H3F3AP84243 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
H3F3AP84243 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
H3F3AP84243 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
H3F3AP84243 SDHDP6-201ENST00000414693 480 ntBASIC5.06□□□□□ -1.6
H3F3AP84243 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.06□□□□□ -1.6
H3F3AP84243 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.06□□□□□ -1.6
H3F3AP84243 VN1R3-201ENST00000418822 919 ntBASIC5.06□□□□□ -1.6
H3F3AP84243 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.06□□□□□ -1.6
H3F3AP84243 AC117434.1-201ENST00000419971 836 ntBASIC5.06□□□□□ -1.6
H3F3AP84243 AC113412.1-201ENST00000425840 504 ntBASIC5.06□□□□□ -1.6
H3F3AP84243 AL662874.1-201ENST00000426065 230 ntBASIC5.06□□□□□ -1.6
H3F3AP84243 RPS29P14-201ENST00000431518 171 ntBASIC5.06□□□□□ -1.6
H3F3AP84243 SUMO2P3-201ENST00000438311 288 ntBASIC5.06□□□□□ -1.6
H3F3AP84243 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.06□□□□□ -1.6
H3F3AP84243 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.06□□□□□ -1.6
H3F3AP84243 AL596266.1-201ENST00000448132 400 ntBASIC5.06□□□□□ -1.6
H3F3AP84243 GAPDHP62-201ENST00000515313 990 ntBASIC5.06□□□□□ -1.6
H3F3AP84243 SNORA43.3-201ENST00000517240 103 ntBASIC5.06□□□□□ -1.6
H3F3AP84243 IGLV3-24-201ENST00000517477 197 ntBASIC5.06□□□□□ -1.6
H3F3AP84243 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.06□□□□□ -1.6
H3F3AP84243 MIR4311-201ENST00000580794 100 ntBASIC5.06□□□□□ -1.6
H3F3AP84243 AC010487.1-201ENST00000594408 1172 ntBASIC5.06□□□□□ -1.6
H3F3AP84243 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.06□□□□□ -1.6
H3F3AP84243 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.06□□□□□ -1.6
H3F3AP84243 RNF19BPY-201ENST00000458209 1550 ntBASIC5.06□□□□□ -1.6
H3F3AP84243 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.06□□□□□ -1.6
H3F3AP84243 AC109446.4-201ENST00000623235 2755 ntBASIC5.06□□□□□ -1.6
H3F3AP84243 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.06□□□□□ -1.6
H3F3AP84243 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
H3F3AP84243 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
H3F3AP84243 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
H3F3AP84243 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.06□□□□□ -1.6
H3F3AP84243 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
H3F3AP84243 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.05□□□□□ -1.6
H3F3AP84243 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.05□□□□□ -1.6
H3F3AP84243 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
H3F3AP84243 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
H3F3AP84243 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.05□□□□□ -1.6
H3F3AP84243 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
H3F3AP84243 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
H3F3AP84243 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
H3F3AP84243 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
H3F3AP84243 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
H3F3AP84243 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.05□□□□□ -1.6
H3F3AP84243 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.05□□□□□ -1.6
H3F3AP84243 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
H3F3AP84243 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
H3F3AP84243 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
H3F3AP84243 GAPDHP24-201ENST00000328713 983 ntBASIC5.05□□□□□ -1.6
H3F3AP84243 RNA5SP46-201ENST00000362370 120 ntBASIC5.05□□□□□ -1.6
H3F3AP84243 RNA5SP510-201ENST00000364697 99 ntBASIC5.05□□□□□ -1.6
H3F3AP84243 OR10T1P-201ENST00000424327 947 ntBASIC5.05□□□□□ -1.6
H3F3AP84243 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.05□□□□□ -1.6
H3F3AP84243 Z84478.1-201ENST00000438230 1219 ntBASIC5.05□□□□□ -1.6
H3F3AP84243 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.05□□□□□ -1.6
H3F3AP84243 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.05□□□□□ -1.6
H3F3AP84243 SNORD125-201ENST00000459538 96 ntBASIC5.05□□□□□ -1.6
H3F3AP84243 AC117394.1-201ENST00000477323 567 ntBASIC5.05□□□□□ -1.6
H3F3AP84243 DUTP7-201ENST00000507982 486 ntBASIC5.05□□□□□ -1.6
H3F3AP84243 RN7SKP253-201ENST00000516424 309 ntBASIC5.05□□□□□ -1.6
H3F3AP84243 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.05□□□□□ -1.6
H3F3AP84243 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.05□□□□□ -1.6
H3F3AP84243 AC010547.6-201ENST00000571789 193 ntBASIC5.05□□□□□ -1.6
H3F3AP84243 MIR3614-201ENST00000581261 86 ntBASIC5.05□□□□□ -1.6
H3F3AP84243 AC010503.3-201ENST00000594355 540 ntBASIC5.05□□□□□ -1.6
H3F3AP84243 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.05□□□□□ -1.6
H3F3AP84243 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.05□□□□□ -1.6
H3F3AP84243 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
H3F3AP84243 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.05□□□□□ -1.6
H3F3AP84243 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
H3F3AP84243 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
H3F3AP84243 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.05□□□□□ -1.6
H3F3AP84243 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
H3F3AP84243 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.05□□□□□ -1.6
H3F3AP84243 SRRM1P3-201ENST00000426911 2678 ntBASIC5.05□□□□□ -1.6
H3F3AP84243 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
H3F3AP84243 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
H3F3AP84243 HSPD1P7-201ENST00000447985 1686 ntBASIC5.05□□□□□ -1.6
H3F3AP84243 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
H3F3AP84243 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.04□□□□□ -1.6
H3F3AP84243 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
H3F3AP84243 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
H3F3AP84243 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.04□□□□□ -1.6
H3F3AP84243 PWAR1-201ENST00000624188 2414 ntBASIC5.04□□□□□ -1.6
H3F3AP84243 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.04□□□□□ -1.6
H3F3AP84243 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.04□□□□□ -1.6
H3F3AP84243 AL031985.1-201ENST00000392713 418 ntBASIC5.04□□□□□ -1.6
H3F3AP84243 AC005042.1-201ENST00000393397 800 ntBASIC5.04□□□□□ -1.6
H3F3AP84243 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.04□□□□□ -1.6
H3F3AP84243 NACAP7-201ENST00000407371 609 ntBASIC5.04□□□□□ -1.6
H3F3AP84243 AC096921.1-201ENST00000411661 375 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms