Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.27□□□□□ -1.57
SEC61A1P61619 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SEC61A1P61619 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SEC61A1P61619 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SEC61A1P61619 AL133243.2-201ENST00000610331 1621 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SEC61A1P61619 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.26□□□□□ -1.57
SEC61A1P61619 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
SEC61A1P61619 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SEC61A1P61619 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SEC61A1P61619 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SEC61A1P61619 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SEC61A1P61619 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
SEC61A1P61619 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
SEC61A1P61619 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SEC61A1P61619 RN7SKP81-201ENST00000365603 331 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SEC61A1P61619 RAB9AP4-201ENST00000415230 609 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.26□□□□□ -1.57
SEC61A1P61619 AL121882.1-201ENST00000422893 417 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.26□□□□□ -1.57
SEC61A1P61619 AL354707.3-201ENST00000427308 331 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 RPSAP65-201ENST00000429660 595 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.26□□□□□ -1.57
SEC61A1P61619 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.26□□□□□ -1.57
SEC61A1P61619 RPS3AP38-201ENST00000435889 763 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 AL645936.1-201ENST00000441979 518 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.26□□□□□ -1.57
SEC61A1P61619 TXNP2-201ENST00000443918 295 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.26□□□□□ -1.57
SEC61A1P61619 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.26□□□□□ -1.57
SEC61A1P61619 RN7SL254P-201ENST00000460609 284 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 RN7SL643P-201ENST00000471845 291 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 RPL12P31-201ENST00000478433 450 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SEC61A1P61619 UBE2V1P12-201ENST00000503954 474 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.26□□□□□ -1.57
SEC61A1P61619 OR4D12P-201ENST00000509361 911 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.26□□□□□ -1.57
SEC61A1P61619 AC108103.1-201ENST00000511286 446 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 RNU6-1102P-201ENST00000516149 96 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 SEC11B-201ENST00000518383 499 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 IGHV4-55-201ENST00000520889 368 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 IGKV2-4-201ENST00000523070 340 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 OR6M2P-201ENST00000529831 871 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 AC006512.2-201ENST00000543250 486 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.26□□□□□ -1.57
SEC61A1P61619 AC090888.3-201ENST00000558917 509 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 AC027176.2-201ENST00000559166 746 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.26□□□□□ -1.57
SEC61A1P61619 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SEC61A1P61619 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.26□□□□□ -1.57
SEC61A1P61619 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.26□□□□□ -1.57
SEC61A1P61619 AC004890.3-201ENST00000605566 1095 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 OR51C1P-201ENST00000608504 942 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 AC084036.1-201ENST00000609190 508 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 AC006946.3-201ENST00000609791 756 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 CR589904.2-201ENST00000612533 440 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 RN7SL261P-201ENST00000613441 282 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.26□□□□□ -1.57
SEC61A1P61619 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.26□□□□□ -1.57
SEC61A1P61619 AC099654.8-201ENST00000637757 681 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SEC61A1P61619 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.26□□□□□ -1.57
SEC61A1P61619 AC096921.2-201ENST00000561507 1916 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 AP001541.1-201ENST00000623322 1904 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 AC018717.1-201ENST00000457712 1505 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
SEC61A1P61619 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SEC61A1P61619 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.26□□□□□ -1.57
SEC61A1P61619 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.26□□□□□ -1.57
SEC61A1P61619 AC110792.3-201ENST00000595906 1614 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.26□□□□□ -1.57
SEC61A1P61619 AC087565.3-202ENST00000642085 1603 ntBASIC5.26□□□□□ -1.57
SEC61A1P61619 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SEC61A1P61619 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SEC61A1P61619 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SEC61A1P61619 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.26□□□□□ -1.57
SEC61A1P61619 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
SEC61A1P61619 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.25□□□□□ -1.57
SEC61A1P61619 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SEC61A1P61619 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.25□□□□□ -1.57
SEC61A1P61619 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SEC61A1P61619 GTF2IP4-201ENST00000453092 2054 ntBASIC5.25□□□□□ -1.57
SEC61A1P61619 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SEC61A1P61619 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SEC61A1P61619 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
SEC61A1P61619 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
SEC61A1P61619 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.25□□□□□ -1.57
SEC61A1P61619 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SEC61A1P61619 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.25□□□□□ -1.57
SEC61A1P61619 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.25□□□□□ -1.57
SEC61A1P61619 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SEC61A1P61619 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SEC61A1P61619 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
SEC61A1P61619 AL078595.2-201ENST00000605309 1780 ntBASIC5.25□□□□□ -1.57
SEC61A1P61619 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SEC61A1P61619 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SEC61A1P61619 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SEC61A1P61619 RNA5SP346-201ENST00000363541 121 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms