Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC4.91□□□□□ -1.62
ACTBP60709 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC4.91□□□□□ -1.62
ACTBP60709 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ACTBP60709 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC4.91□□□□□ -1.62
ACTBP60709 GARSP1-201ENST00000570895 719 ntBASIC4.91□□□□□ -1.62
ACTBP60709 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC4.91□□□□□ -1.62
ACTBP60709 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC4.91□□□□□ -1.62
ACTBP60709 SMIM12P1-201ENST00000603004 274 ntBASIC4.91□□□□□ -1.62
ACTBP60709 FAM72A-208ENST00000607379 1139 ntBASIC4.91□□□□□ -1.62
ACTBP60709 RFPL4AP6-201ENST00000616792 846 ntBASIC4.91□□□□□ -1.62
ACTBP60709 Six3os1_2.1-201ENST00000616963 217 ntBASIC4.91□□□□□ -1.62
ACTBP60709 AL035661.1-201ENST00000620459 1144 ntBASIC4.91□□□□□ -1.62
ACTBP60709 TEX41-293ENST00000630451 690 ntTSL 5 BASIC4.91□□□□□ -1.62
ACTBP60709 TMEM30CP-203ENST00000637814 1035 ntBASIC4.91□□□□□ -1.62
ACTBP60709 AC245100.2-201ENST00000454544 1679 ntBASIC4.91□□□□□ -1.62
ACTBP60709 OR4F13P-202ENST00000560066 2054 ntBASIC4.91□□□□□ -1.62
ACTBP60709 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ACTBP60709 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.91□□□□□ -1.62
ACTBP60709 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ACTBP60709 AC018717.1-201ENST00000457712 1505 ntBASIC4.91□□□□□ -1.62
ACTBP60709 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.91□□□□□ -1.62
ACTBP60709 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.91□□□□□ -1.62
ACTBP60709 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ACTBP60709 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.91□□□□□ -1.62
ACTBP60709 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
ACTBP60709 BTBD10P1-201ENST00000549824 1352 ntBASIC4.91□□□□□ -1.62
ACTBP60709 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.91□□□□□ -1.62
ACTBP60709 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.9□□□□□ -1.62
ACTBP60709 AC112255.1-201ENST00000624070 2493 ntBASIC4.9□□□□□ -1.62
ACTBP60709 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
ACTBP60709 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
ACTBP60709 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
ACTBP60709 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
ACTBP60709 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.9□□□□□ -1.62
ACTBP60709 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.9□□□□□ -1.62
ACTBP60709 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.9□□□□□ -1.62
ACTBP60709 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
ACTBP60709 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
ACTBP60709 AL121886.1-201ENST00000358609 435 ntBASIC4.9□□□□□ -1.63
ACTBP60709 RNU4-44P-201ENST00000363050 141 ntBASIC4.9□□□□□ -1.63
ACTBP60709 SNRPEP6-201ENST00000407465 277 ntBASIC4.9□□□□□ -1.63
ACTBP60709 RNF10P1-201ENST00000418589 369 ntBASIC4.9□□□□□ -1.63
ACTBP60709 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC4.9□□□□□ -1.63
ACTBP60709 AC130360.1-201ENST00000425489 1117 ntBASIC4.9□□□□□ -1.63
ACTBP60709 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4.9□□□□□ -1.63
ACTBP60709 GAPDHP59-201ENST00000435908 267 ntBASIC4.9□□□□□ -1.63
ACTBP60709 PCBP2P1-201ENST00000437262 977 ntBASIC4.9□□□□□ -1.63
ACTBP60709 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC4.9□□□□□ -1.63
ACTBP60709 OR7E116P-201ENST00000448529 957 ntBASIC4.9□□□□□ -1.63
ACTBP60709 RPL5P22-201ENST00000480199 884 ntBASIC4.9□□□□□ -1.63
ACTBP60709 RPL7AP10-201ENST00000481016 791 ntBASIC4.9□□□□□ -1.63
ACTBP60709 ATP5LP5-201ENST00000483050 299 ntBASIC4.9□□□□□ -1.63
ACTBP60709 AC106822.1-201ENST00000502647 526 ntBASIC4.9□□□□□ -1.63
ACTBP60709 AC092349.1-201ENST00000504903 310 ntBASIC4.9□□□□□ -1.63
ACTBP60709 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.9□□□□□ -1.63
ACTBP60709 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.9□□□□□ -1.63
ACTBP60709 AC130365.2-201ENST00000525882 1201 ntBASIC4.9□□□□□ -1.63
ACTBP60709 MRPS21P8-201ENST00000569196 235 ntBASIC4.9□□□□□ -1.63
ACTBP60709 AC004232.2-201ENST00000574245 821 ntBASIC4.9□□□□□ -1.63
ACTBP60709 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC4.9□□□□□ -1.63
ACTBP60709 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC4.9□□□□□ -1.63
ACTBP60709 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC4.9□□□□□ -1.63
ACTBP60709 COX6CP7-201ENST00000597056 208 ntBASIC4.9□□□□□ -1.63
ACTBP60709 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC4.9□□□□□ -1.63
ACTBP60709 AC092681.3-201ENST00000609463 678 ntBASIC4.9□□□□□ -1.63
ACTBP60709 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC4.9□□□□□ -1.63
ACTBP60709 AC008833.1-201ENST00000611633 691 ntBASIC4.9□□□□□ -1.63
ACTBP60709 AL080312.2-201ENST00000613001 630 ntBASIC4.9□□□□□ -1.63
ACTBP60709 AL139099.4-201ENST00000614802 114 ntBASIC4.9□□□□□ -1.63
ACTBP60709 uc_338.31-201ENST00000615595 186 ntBASIC4.9□□□□□ -1.63
ACTBP60709 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.9□□□□□ -1.63
ACTBP60709 AP001005.3-201ENST00000622049 129 ntBASIC4.9□□□□□ -1.63
ACTBP60709 AL357140.4-201ENST00000636827 412 ntBASIC4.9□□□□□ -1.63
ACTBP60709 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
ACTBP60709 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.9□□□□□ -1.63
ACTBP60709 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
ACTBP60709 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
ACTBP60709 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
ACTBP60709 AC079097.1-201ENST00000512187 1399 ntBASIC4.9□□□□□ -1.63
ACTBP60709 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.9□□□□□ -1.63
ACTBP60709 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC4.9□□□□□ -1.63
ACTBP60709 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.9□□□□□ -1.63
ACTBP60709 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
ACTBP60709 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ACTBP60709 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ACTBP60709 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
ACTBP60709 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ACTBP60709 AC083899.1-201ENST00000454465 3819 ntBASIC4.89□□□□□ -1.63
ACTBP60709 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ACTBP60709 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.89□□□□□ -1.63
ACTBP60709 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ACTBP60709 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ACTBP60709 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ACTBP60709 SNORA21-201ENST00000362423 132 ntBASIC4.89□□□□□ -1.63
ACTBP60709 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.89□□□□□ -1.63
ACTBP60709 RBBP4P5-201ENST00000398583 1266 ntBASIC4.89□□□□□ -1.63
ACTBP60709 AL132875.1-201ENST00000403623 949 ntBASIC4.89□□□□□ -1.63
ACTBP60709 RN7SKP86-201ENST00000410454 332 ntBASIC4.89□□□□□ -1.63
ACTBP60709 RN7SKP108-201ENST00000411367 328 ntBASIC4.89□□□□□ -1.63
ACTBP60709 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms