Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
PTPN9P43378 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.06□□□□□ -1.44
PTPN9P43378 AC108865.2-201ENST00000606881 432 ntBASIC6.06□□□□□ -1.44
PTPN9P43378 MIR6071-201ENST00000616741 78 ntBASIC6.06□□□□□ -1.44
PTPN9P43378 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTPN9P43378 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTPN9P43378 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTPN9P43378 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.06□□□□□ -1.44
PTPN9P43378 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PTPN9P43378 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.06□□□□□ -1.44
PTPN9P43378 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
PTPN9P43378 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTPN9P43378 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.06□□□□□ -1.44
PTPN9P43378 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
PTPN9P43378 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.06□□□□□ -1.44
PTPN9P43378 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTPN9P43378 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTPN9P43378 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PTPN9P43378 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
PTPN9P43378 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
PTPN9P43378 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTPN9P43378 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTPN9P43378 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTPN9P43378 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
PTPN9P43378 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.05□□□□□ -1.44
PTPN9P43378 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTPN9P43378 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
PTPN9P43378 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTPN9P43378 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTPN9P43378 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PTPN9P43378 RNA5SP91-201ENST00000390902 119 ntBASIC6.05□□□□□ -1.44
PTPN9P43378 RPL11P3-201ENST00000395256 523 ntBASIC6.05□□□□□ -1.44
PTPN9P43378 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
PTPN9P43378 AC021876.1-201ENST00000425959 359 ntBASIC6.05□□□□□ -1.44
PTPN9P43378 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.05□□□□□ -1.44
PTPN9P43378 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTPN9P43378 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTPN9P43378 OR9N1P-201ENST00000491296 333 ntBASIC6.05□□□□□ -1.44
PTPN9P43378 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.05□□□□□ -1.44
PTPN9P43378 PFN1P8-201ENST00000497012 543 ntBASIC6.05□□□□□ -1.44
PTPN9P43378 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.05□□□□□ -1.44
PTPN9P43378 AC008628.1-201ENST00000508663 265 ntBASIC6.05□□□□□ -1.44
PTPN9P43378 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC6.05□□□□□ -1.44
PTPN9P43378 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
PTPN9P43378 SETP12-201ENST00000514068 805 ntBASIC6.05□□□□□ -1.44
PTPN9P43378 AC005363.1-201ENST00000530779 351 ntBASIC6.05□□□□□ -1.44
PTPN9P43378 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.05□□□□□ -1.44
PTPN9P43378 AC068305.2-201ENST00000550567 1205 ntBASIC6.05□□□□□ -1.44
PTPN9P43378 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.05□□□□□ -1.44
PTPN9P43378 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.05□□□□□ -1.44
PTPN9P43378 AC027281.1-201ENST00000574178 758 ntBASIC6.05□□□□□ -1.44
PTPN9P43378 AC060780.2-201ENST00000589047 198 ntBASIC6.05□□□□□ -1.44
PTPN9P43378 COX6CP7-201ENST00000597056 208 ntBASIC6.05□□□□□ -1.44
PTPN9P43378 AL356752.1-201ENST00000615844 593 ntBASIC6.05□□□□□ -1.44
PTPN9P43378 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTPN9P43378 AC022919.1-201ENST00000624979 626 ntBASIC6.05□□□□□ -1.44
PTPN9P43378 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.05□□□□□ -1.44
PTPN9P43378 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.05□□□□□ -1.44
PTPN9P43378 DNM1P47-203ENST00000571780 12667 ntBASIC6.05□□□□□ -1.44
PTPN9P43378 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
PTPN9P43378 AP004607.3-201ENST00000530354 3915 ntBASIC6.05□□□□□ -1.44
PTPN9P43378 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTPN9P43378 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTPN9P43378 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.05□□□□□ -1.44
PTPN9P43378 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTPN9P43378 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTPN9P43378 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTPN9P43378 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.05□□□□□ -1.44
PTPN9P43378 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.05□□□□□ -1.44
PTPN9P43378 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.04□□□□□ -1.44
PTPN9P43378 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.04□□□□□ -1.44
PTPN9P43378 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
PTPN9P43378 AC090220.1-201ENST00000593078 1699 ntBASIC6.04□□□□□ -1.44
PTPN9P43378 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.04□□□□□ -1.44
PTPN9P43378 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.04□□□□□ -1.44
PTPN9P43378 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.04□□□□□ -1.44
PTPN9P43378 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
PTPN9P43378 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTPN9P43378 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTPN9P43378 AL442128.2-201ENST00000620246 1824 ntBASIC6.04□□□□□ -1.44
PTPN9P43378 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
PTPN9P43378 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTPN9P43378 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTPN9P43378 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.04□□□□□ -1.44
PTPN9P43378 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
PTPN9P43378 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.04□□□□□ -1.44
PTPN9P43378 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.04□□□□□ -1.44
PTPN9P43378 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.04□□□□□ -1.44
PTPN9P43378 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.04□□□□□ -1.44
PTPN9P43378 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.04□□□□□ -1.44
PTPN9P43378 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTPN9P43378 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTPN9P43378 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC6.04□□□□□ -1.44
PTPN9P43378 NPM1P37-201ENST00000403105 874 ntBASIC6.04□□□□□ -1.44
PTPN9P43378 RN7SKP240-201ENST00000410583 375 ntBASIC6.04□□□□□ -1.44
PTPN9P43378 AL357752.1-201ENST00000412817 349 ntBASIC6.04□□□□□ -1.44
PTPN9P43378 EEF1B2P8-201ENST00000414101 671 ntBASIC6.04□□□□□ -1.44
PTPN9P43378 MRPL53P1-201ENST00000414323 319 ntBASIC6.04□□□□□ -1.44
PTPN9P43378 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.04□□□□□ -1.44
PTPN9P43378 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms