Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CFTRP13569 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC9.26□□□□□ -0.93
CFTRP13569 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
CFTRP13569 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CFTRP13569 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
CFTRP13569 ZNF840P-201ENST00000504759 1996 ntBASIC9.25□□□□□ -0.93
CFTRP13569 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC9.25□□□□□ -0.93
CFTRP13569 AC092747.4-201ENST00000620519 1861 ntBASIC9.25□□□□□ -0.93
CFTRP13569 HSPD1P7-201ENST00000447985 1686 ntBASIC9.25□□□□□ -0.93
CFTRP13569 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CFTRP13569 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
CFTRP13569 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC9.25□□□□□ -0.93
CFTRP13569 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
CFTRP13569 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
CFTRP13569 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CFTRP13569 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC9.25□□□□□ -0.93
CFTRP13569 RPL34P20-201ENST00000442771 351 ntBASIC9.25□□□□□ -0.93
CFTRP13569 TPT1P12-201ENST00000448968 492 ntBASIC9.25□□□□□ -0.93
CFTRP13569 RN7SL481P-201ENST00000477764 299 ntBASIC9.25□□□□□ -0.93
CFTRP13569 BTF3P13-201ENST00000513224 490 ntBASIC9.25□□□□□ -0.93
CFTRP13569 IGHVIII-13-1-201ENST00000517613 291 ntBASIC9.25□□□□□ -0.93
CFTRP13569 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CFTRP13569 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
CFTRP13569 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
CFTRP13569 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
CFTRP13569 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
CFTRP13569 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CFTRP13569 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
CFTRP13569 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CFTRP13569 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC9.25□□□□□ -0.93
CFTRP13569 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
CFTRP13569 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
CFTRP13569 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CFTRP13569 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
CFTRP13569 AC006600.2-201ENST00000624834 2506 ntBASIC9.24□□□□□ -0.93
CFTRP13569 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
CFTRP13569 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CFTRP13569 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
CFTRP13569 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
CFTRP13569 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
CFTRP13569 IARS-213ENST00000627121 4587 ntTSL 5 BASIC9.24□□□□□ -0.93
CFTRP13569 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
CFTRP13569 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
CFTRP13569 RNGTTP1-201ENST00000420965 728 ntBASIC9.24□□□□□ -0.93
CFTRP13569 RPS4XP16-201ENST00000427198 791 ntBASIC9.24□□□□□ -0.93
CFTRP13569 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC9.24□□□□□ -0.93
CFTRP13569 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC9.24□□□□□ -0.93
CFTRP13569 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC9.24□□□□□ -0.93
CFTRP13569 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC9.24□□□□□ -0.93
CFTRP13569 NDUFAF4P3-201ENST00000456468 525 ntBASIC9.24□□□□□ -0.93
CFTRP13569 snoU13.20-201ENST00000459180 104 ntBASIC9.24□□□□□ -0.93
CFTRP13569 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC9.24□□□□□ -0.93
CFTRP13569 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC9.24□□□□□ -0.93
CFTRP13569 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC9.24□□□□□ -0.93
CFTRP13569 OR5AM1P-201ENST00000532136 1032 ntBASIC9.24□□□□□ -0.93
CFTRP13569 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC9.24□□□□□ -0.93
CFTRP13569 AC137695.1-201ENST00000604126 489 ntBASIC9.24□□□□□ -0.93
CFTRP13569 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CFTRP13569 AC092070.2-203ENST00000598377 3644 ntBASIC9.24□□□□□ -0.93
CFTRP13569 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC9.24□□□□□ -0.93
CFTRP13569 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CFTRP13569 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC9.24□□□□□ -0.93
CFTRP13569 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CFTRP13569 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
CFTRP13569 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CFTRP13569 AC022819.1-201ENST00000563495 3910 ntBASIC9.24□□□□□ -0.93
CFTRP13569 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC9.24□□□□□ -0.93
CFTRP13569 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CFTRP13569 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CFTRP13569 RNU1-136P-201ENST00000384181 164 ntBASIC9.23□□□□□ -0.93
CFTRP13569 AC096921.1-201ENST00000411661 375 ntBASIC9.23□□□□□ -0.93
CFTRP13569 GJA6P-201ENST00000415117 1042 ntBASIC9.23□□□□□ -0.93
CFTRP13569 AL590399.4-201ENST00000436561 601 ntBASIC9.23□□□□□ -0.93
CFTRP13569 AC058823.1-201ENST00000485315 474 ntBASIC9.23□□□□□ -0.93
CFTRP13569 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC9.23□□□□□ -0.93
CFTRP13569 XIST-210ENST00000602863 775 ntTSL 3 BASIC9.23□□□□□ -0.93
CFTRP13569 MEMO1P5-201ENST00000604810 406 ntBASIC9.23□□□□□ -0.93
CFTRP13569 AL356752.1-201ENST00000615844 593 ntBASIC9.23□□□□□ -0.93
CFTRP13569 MTCO1P1-201ENST00000624263 1081 ntBASIC9.23□□□□□ -0.93
CFTRP13569 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
CFTRP13569 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CFTRP13569 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CFTRP13569 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CFTRP13569 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
CFTRP13569 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CFTRP13569 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
CFTRP13569 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CFTRP13569 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CFTRP13569 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CFTRP13569 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
CFTRP13569 MIR1182-201ENST00000408363 97 ntBASIC9.22□□□□□ -0.93
CFTRP13569 AL365220.1-201ENST00000432923 399 ntBASIC9.22□□□□□ -0.93
CFTRP13569 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC9.22□□□□□ -0.93
CFTRP13569 NDUFA5P9-201ENST00000472609 340 ntBASIC9.22□□□□□ -0.93
CFTRP13569 RN7SL423P-201ENST00000486202 304 ntBASIC9.22□□□□□ -0.93
CFTRP13569 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
CFTRP13569 AC011487.3-201ENST00000593607 453 ntBASIC9.22□□□□□ -0.93
CFTRP13569 AC009237.13-201ENST00000603193 276 ntBASIC9.22□□□□□ -0.93
CFTRP13569 EIF3FP1-201ENST00000613970 806 ntBASIC9.22□□□□□ -0.93
CFTRP13569 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC9.22□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms