Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL6A3P12111 GAS7-204ENST00000437099 8003 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL6A3P12111 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL6A3P12111 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL6A3P12111 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL6A3P12111 RN7SKP114-201ENST00000410327 279 ntBASIC5.49□□□□□ -1.53
COL6A3P12111 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.49□□□□□ -1.53
COL6A3P12111 NDUFA5P8-201ENST00000449019 346 ntBASIC5.49□□□□□ -1.53
COL6A3P12111 OR52J1P-201ENST00000450596 932 ntBASIC5.49□□□□□ -1.53
COL6A3P12111 BZW1P1-201ENST00000454901 1240 ntBASIC5.49□□□□□ -1.53
COL6A3P12111 AC073073.1-201ENST00000493920 463 ntBASIC5.49□□□□□ -1.53
COL6A3P12111 SSX8-201ENST00000506270 579 ntBASIC5.49□□□□□ -1.53
COL6A3P12111 AC095057.1-201ENST00000507583 168 ntBASIC5.49□□□□□ -1.53
COL6A3P12111 RNA5SP43-201ENST00000516559 110 ntBASIC5.49□□□□□ -1.53
COL6A3P12111 NPM1P6-201ENST00000521088 871 ntBASIC5.49□□□□□ -1.53
COL6A3P12111 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.49□□□□□ -1.53
COL6A3P12111 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.49□□□□□ -1.53
COL6A3P12111 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
COL6A3P12111 MIR6853-201ENST00000619642 74 ntBASIC5.49□□□□□ -1.53
COL6A3P12111 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.49□□□□□ -1.53
COL6A3P12111 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.49□□□□□ -1.53
COL6A3P12111 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL6A3P12111 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC5.48□□□□□ -1.53
COL6A3P12111 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL6A3P12111 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.48□□□□□ -1.53
COL6A3P12111 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC5.48□□□□□ -1.53
COL6A3P12111 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
COL6A3P12111 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
COL6A3P12111 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.48□□□□□ -1.53
COL6A3P12111 SNORA70C-201ENST00000384538 135 ntBASIC5.48□□□□□ -1.53
COL6A3P12111 ARL4AP4-201ENST00000434170 518 ntBASIC5.48□□□□□ -1.53
COL6A3P12111 KRT8P51-201ENST00000438938 274 ntBASIC5.48□□□□□ -1.53
COL6A3P12111 RPL7P15-201ENST00000461190 712 ntBASIC5.48□□□□□ -1.53
COL6A3P12111 AC010326.1-201ENST00000462726 602 ntBASIC5.48□□□□□ -1.53
COL6A3P12111 MIR3200-201ENST00000580767 85 ntBASIC5.48□□□□□ -1.53
COL6A3P12111 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.48□□□□□ -1.53
COL6A3P12111 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL6A3P12111 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
COL6A3P12111 WDFY4-201ENST00000325239 10079 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
COL6A3P12111 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL6A3P12111 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL6A3P12111 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC5.48□□□□□ -1.53
COL6A3P12111 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
COL6A3P12111 EDA-213ENST00000616899 4643 ntTSL 5 BASIC5.48□□□□□ -1.53
COL6A3P12111 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
COL6A3P12111 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL6A3P12111 SNHG14-208ENST00000453082 6087 ntTSL 5 BASIC5.48□□□□□ -1.53
COL6A3P12111 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
COL6A3P12111 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL6A3P12111 MIR634-201ENST00000385208 97 ntBASIC5.48□□□□□ -1.53
COL6A3P12111 NDUFB4P4-201ENST00000404822 243 ntBASIC5.48□□□□□ -1.53
COL6A3P12111 AC104634.1-201ENST00000452720 462 ntBASIC5.48□□□□□ -1.53
COL6A3P12111 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.48□□□□□ -1.53
COL6A3P12111 OR4A17P-201ENST00000526032 904 ntBASIC5.48□□□□□ -1.53
COL6A3P12111 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.48□□□□□ -1.53
COL6A3P12111 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.48□□□□□ -1.53
COL6A3P12111 AC139493.1-201ENST00000604368 397 ntBASIC5.48□□□□□ -1.53
COL6A3P12111 AC114781.5-201ENST00000615297 108 ntBASIC5.48□□□□□ -1.53
COL6A3P12111 AC244100.1-202ENST00000621554 382 ntBASIC5.48□□□□□ -1.53
COL6A3P12111 RNA5SP196-201ENST00000625967 102 ntBASIC5.48□□□□□ -1.53
COL6A3P12111 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
COL6A3P12111 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.48□□□□□ -1.53
COL6A3P12111 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.48□□□□□ -1.53
COL6A3P12111 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL6A3P12111 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.47□□□□□ -1.53
COL6A3P12111 SPEN-201ENST00000375759 12232 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL6A3P12111 AP002530.1-201ENST00000405705 684 ntBASIC5.47□□□□□ -1.53
COL6A3P12111 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL6A3P12111 ARL2BPP10-201ENST00000446487 531 ntBASIC5.47□□□□□ -1.53
COL6A3P12111 RPL23AP2-201ENST00000471227 466 ntBASIC5.47□□□□□ -1.53
COL6A3P12111 SNORA31.9-201ENST00000516429 84 ntBASIC5.47□□□□□ -1.53
COL6A3P12111 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.47□□□□□ -1.53
COL6A3P12111 AC024023.1-201ENST00000624530 922 ntBASIC5.47□□□□□ -1.53
COL6A3P12111 SVEP1-203ENST00000401783 12350 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
COL6A3P12111 RNF152-201ENST00000312828 9501 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
COL6A3P12111 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL6A3P12111 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC5.47□□□□□ -1.53
COL6A3P12111 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
COL6A3P12111 HRNR-201ENST00000368801 9623 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL6A3P12111 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL6A3P12111 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL6A3P12111 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL6A3P12111 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL6A3P12111 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL6A3P12111 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL6A3P12111 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.53
COL6A3P12111 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL6A3P12111 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL6A3P12111 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
COL6A3P12111 DSP-201ENST00000379802 9796 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL6A3P12111 TRAV35-201ENST00000390462 330 ntBASIC5.47□□□□□ -1.53
COL6A3P12111 CYCSP19-201ENST00000411715 316 ntBASIC5.47□□□□□ -1.53
COL6A3P12111 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.47□□□□□ -1.53
COL6A3P12111 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.47□□□□□ -1.53
COL6A3P12111 AC096775.1-201ENST00000437724 448 ntBASIC5.47□□□□□ -1.53
COL6A3P12111 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.47□□□□□ -1.53
COL6A3P12111 AL591034.3-201ENST00000605511 685 ntBASIC5.47□□□□□ -1.53
COL6A3P12111 CELF2-209ENST00000631460 5538 ntTSL 5 BASIC5.47□□□□□ -1.53
COL6A3P12111 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
COL6A3P12111 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms