Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.96□□□□□ -1.46
APOEP02649 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.96□□□□□ -1.46
APOEP02649 AC096996.1-201ENST00000563813 325 ntBASIC5.96□□□□□ -1.46
APOEP02649 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
APOEP02649 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.96□□□□□ -1.46
APOEP02649 OR7A8P-201ENST00000595427 913 ntBASIC5.96□□□□□ -1.46
APOEP02649 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.96□□□□□ -1.46
APOEP02649 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.96□□□□□ -1.46
APOEP02649 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
APOEP02649 MAPK10-338ENST00000641647 3362 ntBASIC5.96□□□□□ -1.46
APOEP02649 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
APOEP02649 MFSD8-239ENST00000641590 2479 ntBASIC5.96□□□□□ -1.46
APOEP02649 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
APOEP02649 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
APOEP02649 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
APOEP02649 RPS2P45-201ENST00000469997 2057 ntBASIC5.95□□□□□ -1.46
APOEP02649 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
APOEP02649 AC020633.1-201ENST00000468439 2247 ntBASIC5.95□□□□□ -1.46
APOEP02649 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
APOEP02649 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
APOEP02649 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.95□□□□□ -1.46
APOEP02649 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.95□□□□□ -1.46
APOEP02649 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
APOEP02649 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
APOEP02649 AL159987.1-201ENST00000347911 293 ntBASIC5.95□□□□□ -1.46
APOEP02649 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
APOEP02649 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
APOEP02649 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.95□□□□□ -1.46
APOEP02649 RNA5SP394-201ENST00000364216 119 ntBASIC5.95□□□□□ -1.46
APOEP02649 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
APOEP02649 SNORA17A-201ENST00000391185 133 ntBASIC5.95□□□□□ -1.46
APOEP02649 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.95□□□□□ -1.46
APOEP02649 RNA5SP178-201ENST00000410380 128 ntBASIC5.95□□□□□ -1.46
APOEP02649 RN7SKP279-201ENST00000411383 298 ntBASIC5.95□□□□□ -1.46
APOEP02649 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.95□□□□□ -1.46
APOEP02649 BX119904.3-201ENST00000428194 957 ntBASIC5.95□□□□□ -1.46
APOEP02649 AL161636.2-201ENST00000445179 927 ntBASIC5.95□□□□□ -1.46
APOEP02649 HMGN1P36-201ENST00000446623 298 ntBASIC5.95□□□□□ -1.46
APOEP02649 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.95□□□□□ -1.46
APOEP02649 LRRC37A14P-201ENST00000452297 462 ntBASIC5.95□□□□□ -1.46
APOEP02649 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
APOEP02649 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.95□□□□□ -1.46
APOEP02649 MTATP6P1-201ENST00000514057 681 ntBASIC5.95□□□□□ -1.46
APOEP02649 RNU6-615P-201ENST00000516065 106 ntBASIC5.95□□□□□ -1.46
APOEP02649 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.95□□□□□ -1.46
APOEP02649 AC020937.1-201ENST00000519677 1013 ntBASIC5.95□□□□□ -1.46
APOEP02649 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.95□□□□□ -1.46
APOEP02649 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.95□□□□□ -1.46
APOEP02649 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.95□□□□□ -1.46
APOEP02649 MIR3614-201ENST00000581261 86 ntBASIC5.95□□□□□ -1.46
APOEP02649 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.95□□□□□ -1.46
APOEP02649 NANOGP3-201ENST00000605855 286 ntBASIC5.95□□□□□ -1.46
APOEP02649 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
APOEP02649 SNORA17.5-201ENST00000630429 132 ntBASIC5.95□□□□□ -1.46
APOEP02649 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.95□□□□□ -1.46
APOEP02649 AC079776.5-201ENST00000641920 211 ntBASIC5.95□□□□□ -1.46
APOEP02649 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
APOEP02649 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
APOEP02649 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
APOEP02649 AC063923.1-201ENST00000478982 1619 ntBASIC5.95□□□□□ -1.46
APOEP02649 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
APOEP02649 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.95□□□□□ -1.46
APOEP02649 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
APOEP02649 AC092451.3-201ENST00000625067 1343 ntBASIC5.95□□□□□ -1.46
APOEP02649 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
APOEP02649 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
APOEP02649 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
APOEP02649 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
APOEP02649 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
APOEP02649 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
APOEP02649 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
APOEP02649 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.94□□□□□ -1.46
APOEP02649 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.94□□□□□ -1.46
APOEP02649 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
APOEP02649 RNF19BPY-201ENST00000458209 1550 ntBASIC5.94□□□□□ -1.46
APOEP02649 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.94□□□□□ -1.46
APOEP02649 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.94□□□□□ -1.46
APOEP02649 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.94□□□□□ -1.46
APOEP02649 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
APOEP02649 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
APOEP02649 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
APOEP02649 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
APOEP02649 SNORA64.1-201ENST00000362600 132 ntBASIC5.94□□□□□ -1.46
APOEP02649 RNA5SP435-201ENST00000364044 108 ntBASIC5.94□□□□□ -1.46
APOEP02649 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
APOEP02649 RNA5SP122-201ENST00000384457 108 ntBASIC5.94□□□□□ -1.46
APOEP02649 MIR130A-201ENST00000385274 89 ntBASIC5.94□□□□□ -1.46
APOEP02649 RN7SKP286-201ENST00000410894 299 ntBASIC5.94□□□□□ -1.46
APOEP02649 RMRPP5-201ENST00000411156 267 ntBASIC5.94□□□□□ -1.46
APOEP02649 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.94□□□□□ -1.46
APOEP02649 AC093155.2-201ENST00000420734 937 ntBASIC5.94□□□□□ -1.46
APOEP02649 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.94□□□□□ -1.46
APOEP02649 AC104843.2-201ENST00000427666 297 ntBASIC5.94□□□□□ -1.46
APOEP02649 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.94□□□□□ -1.46
APOEP02649 AC064862.4-201ENST00000442180 334 ntBASIC5.94□□□□□ -1.46
APOEP02649 SETP20-201ENST00000457046 852 ntBASIC5.94□□□□□ -1.46
APOEP02649 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.94□□□□□ -1.46
APOEP02649 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.94□□□□□ -1.46
APOEP02649 RPL7P51-201ENST00000490532 749 ntBASIC5.94□□□□□ -1.46
APOEP02649 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms