Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AP003485.1-201ENST00000625093 753 ntBASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 OR4G3P-201ENST00000633500 913 ntBASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 AC009120.2-204ENST00000621548 2032 ntBASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 MAPK10-287ENST00000641217 3037 ntBASIC5.87□□□□□ -1.47
CCDC187A0A096LP49 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 CR788268.1-201ENST00000603931 1809 ntBASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 FO082842.1-201ENST00000423552 1370 ntBASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 RNA5SP478-201ENST00000364657 115 ntBASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 RNU6-1000P-201ENST00000391066 106 ntBASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 U3.25-201ENST00000391209 220 ntBASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 RN7SKP293-201ENST00000411389 296 ntBASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 AC245060.4-201ENST00000413293 1121 ntBASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 ARL2BPP3-201ENST00000421226 480 ntBASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 BX119321.1-201ENST00000428912 797 ntBASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 AC011242.1-201ENST00000433596 1158 ntBASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 AC064862.4-201ENST00000442180 334 ntBASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 AL157884.3-201ENST00000448273 1184 ntBASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 RPS27AP2-201ENST00000457576 465 ntBASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 AC110749.1-201ENST00000462007 357 ntBASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 AC084337.1-201ENST00000524809 686 ntBASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 MIR5095-201ENST00000578844 88 ntBASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 AC034236.3-201ENST00000605999 461 ntBASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 AL592494.3-201ENST00000609485 464 ntBASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 RN7SL787P-201ENST00000613000 284 ntBASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 AL050303.3-201ENST00000613704 284 ntBASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 AL133370.2-201ENST00000619934 439 ntBASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC5.86□□□□□ -1.47
CCDC187A0A096LP49 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC187A0A096LP49 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC187A0A096LP49 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC187A0A096LP49 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
CCDC187A0A096LP49 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC187A0A096LP49 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC187A0A096LP49 WDR95P-201ENST00000425638 1542 ntBASIC5.85□□□□□ -1.47
CCDC187A0A096LP49 MTCO1P15-201ENST00000529569 1526 ntBASIC5.85□□□□□ -1.47
CCDC187A0A096LP49 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms