Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC10.04□□□□□ -0.8
PHF8Q9UPP1 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PHF8Q9UPP1 Y_RNA.138-201ENST00000363462 102 ntBASIC10.04□□□□□ -0.8
PHF8Q9UPP1 SNORA63C-201ENST00000364578 129 ntBASIC10.04□□□□□ -0.8
PHF8Q9UPP1 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PHF8Q9UPP1 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC10.04□□□□□ -0.8
PHF8Q9UPP1 AL773545.3-201ENST00000414297 706 ntBASIC10.04□□□□□ -0.8
PHF8Q9UPP1 RPL26P29-201ENST00000415623 438 ntBASIC10.04□□□□□ -0.8
PHF8Q9UPP1 AC092647.1-201ENST00000420654 287 ntBASIC10.04□□□□□ -0.8
PHF8Q9UPP1 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC10.04□□□□□ -0.8
PHF8Q9UPP1 CALM1P1-201ENST00000442082 433 ntBASIC10.04□□□□□ -0.8
PHF8Q9UPP1 BX842559.2-201ENST00000451418 605 ntBASIC10.04□□□□□ -0.8
PHF8Q9UPP1 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC10.04□□□□□ -0.8
PHF8Q9UPP1 snoU109.1-201ENST00000459339 135 ntBASIC10.04□□□□□ -0.8
PHF8Q9UPP1 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
PHF8Q9UPP1 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC10.04□□□□□ -0.8
PHF8Q9UPP1 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
PHF8Q9UPP1 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC10.04□□□□□ -0.8
PHF8Q9UPP1 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC10.04□□□□□ -0.8
PHF8Q9UPP1 AC008802.1-201ENST00000519121 791 ntBASIC10.04□□□□□ -0.8
PHF8Q9UPP1 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC10.04□□□□□ -0.8
PHF8Q9UPP1 OSBPL9P2-201ENST00000526582 1228 ntBASIC10.04□□□□□ -0.8
PHF8Q9UPP1 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC10.04□□□□□ -0.8
PHF8Q9UPP1 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC10.04□□□□□ -0.8
PHF8Q9UPP1 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
PHF8Q9UPP1 AC078814.3-201ENST00000553036 491 ntBASIC10.04□□□□□ -0.8
PHF8Q9UPP1 PSMB7P1-201ENST00000556349 514 ntBASIC10.04□□□□□ -0.8
PHF8Q9UPP1 AC103968.1-201ENST00000557841 573 ntBASIC10.04□□□□□ -0.8
PHF8Q9UPP1 LINC01974-201ENST00000575126 494 ntTSL 3 BASIC10.04□□□□□ -0.8
PHF8Q9UPP1 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC10.04□□□□□ -0.8
PHF8Q9UPP1 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC10.04□□□□□ -0.8
PHF8Q9UPP1 AC006006.1-201ENST00000603082 144 ntBASIC10.04□□□□□ -0.8
PHF8Q9UPP1 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC10.04□□□□□ -0.8
PHF8Q9UPP1 RMST_5.1-201ENST00000618704 126 ntBASIC10.04□□□□□ -0.8
PHF8Q9UPP1 AC008626.2-201ENST00000624425 248 ntBASIC10.04□□□□□ -0.8
PHF8Q9UPP1 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC10.04□□□□□ -0.8
PHF8Q9UPP1 OAZ3-211ENST00000639906 708 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
PHF8Q9UPP1 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PHF8Q9UPP1 KCNJ15-221ENST00000613499 3049 ntAPPRIS P1 TSL 4 BASIC10.04□□□□□ -0.8
PHF8Q9UPP1 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC10.04□□□□□ -0.8
PHF8Q9UPP1 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
PHF8Q9UPP1 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
PHF8Q9UPP1 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
PHF8Q9UPP1 AL079307.1-201ENST00000553312 5982 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
PHF8Q9UPP1 MRPS17P1-201ENST00000596009 3130 ntBASIC10.04□□□□□ -0.8
PHF8Q9UPP1 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 ZNF3-202ENST00000299667 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 CTNNA2-201ENST00000343114 2927 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 BRDT-204ENST00000394530 3207 ntTSL 2 BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 PITRM1-AS1-201ENST00000430356 3998 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 EPN2-204ENST00000395620 3860 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 DDX24-211ENST00000640432 2580 ntTSL 5 BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 AC126773.4-201ENST00000612545 3043 ntBASIC10.03□□□□□ -0.8
PHF8Q9UPP1 LINC00547-201ENST00000612438 3314 ntTSL 2 BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 RPL26P37-201ENST00000411983 438 ntBASIC10.03□□□□□ -0.8
PHF8Q9UPP1 ALDH7A1P4-201ENST00000412255 178 ntBASIC10.03□□□□□ -0.8
PHF8Q9UPP1 AL389915.1-201ENST00000422463 466 ntBASIC10.03□□□□□ -0.8
PHF8Q9UPP1 AL138899.2-201ENST00000439139 499 ntBASIC10.03□□□□□ -0.8
PHF8Q9UPP1 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 AP003385.3-201ENST00000472498 287 ntBASIC10.03□□□□□ -0.8
PHF8Q9UPP1 AC108688.1-201ENST00000485817 713 ntBASIC10.03□□□□□ -0.8
PHF8Q9UPP1 AC008629.2-201ENST00000503783 483 ntBASIC10.03□□□□□ -0.8
PHF8Q9UPP1 AC114324.2-202ENST00000503812 134 ntBASIC10.03□□□□□ -0.8
PHF8Q9UPP1 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 LINC02159-202ENST00000518580 2323 ntTSL 2 BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 GLYATL1P4-201ENST00000529326 906 ntBASIC10.03□□□□□ -0.8
PHF8Q9UPP1 DCN-209ENST00000546745 1026 ntTSL 3 BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 AC023310.2-201ENST00000553844 547 ntBASIC10.03□□□□□ -0.8
PHF8Q9UPP1 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 MIR4437-201ENST00000581331 60 ntBASIC10.03□□□□□ -0.8
PHF8Q9UPP1 AL445670.1-201ENST00000618889 801 ntBASIC10.03□□□□□ -0.8
PHF8Q9UPP1 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 AP002358.1-201ENST00000399003 2805 ntTSL 2 BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 AC127502.2-201ENST00000602663 2351 ntBASIC10.03□□□□□ -0.8
PHF8Q9UPP1 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 BRD7P2-201ENST00000466133 1944 ntBASIC10.03□□□□□ -0.8
PHF8Q9UPP1 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
PHF8Q9UPP1 AC012078.1-201ENST00000405035 1646 ntBASIC10.03□□□□□ -0.8
PHF8Q9UPP1 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms