Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 RNA5SP46-201ENST00000362370 120 ntBASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 RN7SKP160-201ENST00000363804 340 ntBASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 RNA5SP132-201ENST00000364725 118 ntBASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 TRAV35-201ENST00000390462 330 ntBASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 NPM1P38-201ENST00000403835 865 ntBASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 PTCD2P2-201ENST00000415579 1095 ntBASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 AK4P4-201ENST00000419465 646 ntBASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 RAD1P2-201ENST00000446414 663 ntBASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 AC073909.1-201ENST00000447112 999 ntBASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 RPS23P6-201ENST00000466136 431 ntBASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 RN7SL466P-201ENST00000497546 295 ntBASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 AC008638.1-201ENST00000506035 866 ntBASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 AC138866.2-201ENST00000508650 584 ntBASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 AC109481.1-201ENST00000509173 282 ntBASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 MIR4433B-201ENST00000581329 102 ntBASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 AC239803.2-201ENST00000610161 430 ntBASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 uc_338.26-201ENST00000612659 160 ntBASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 RN7SL544P-201ENST00000617232 284 ntBASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 RN7SL763P-201ENST00000620922 284 ntBASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 AL691477.1-201ENST00000624398 162 ntBASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HDAC6Q9UBN7 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 RN7SKP29-201ENST00000410957 272 ntBASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 RPS3AP38-201ENST00000435889 763 ntBASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 LRRC37A14P-201ENST00000452297 462 ntBASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 ACTR6P1-201ENST00000514311 1104 ntBASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 SNORA43.3-201ENST00000517240 103 ntBASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 TPM3P3-201ENST00000521343 354 ntBASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 NPM1P42-201ENST00000560329 862 ntBASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 AC016180.1-201ENST00000567945 403 ntBASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 SNORA35B-201ENST00000607417 129 ntBASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 AC087565.3-203ENST00000641018 837 ntBASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
HDAC6Q9UBN7 AP001284.1-201ENST00000528393 2118 ntBASIC6.56□□□□□ -1.36
HDAC6Q9UBN7 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 146.6 ms