Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM2Q9C040 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM2Q9C040 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM2Q9C040 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM2Q9C040 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM2Q9C040 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM2Q9C040 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM2Q9C040 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM2Q9C040 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM2Q9C040 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM2Q9C040 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM2Q9C040 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM2Q9C040 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM2Q9C040 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM2Q9C040 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 RNU1-65P-201ENST00000363919 148 ntBASIC5.69□□□□□ -1.5
TRIM2Q9C040 SNORA43.1-201ENST00000364863 140 ntBASIC5.69□□□□□ -1.5
TRIM2Q9C040 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM2Q9C040 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM2Q9C040 RPL23AP17-201ENST00000401064 499 ntBASIC5.69□□□□□ -1.5
TRIM2Q9C040 AL121835.1-201ENST00000404250 354 ntBASIC5.69□□□□□ -1.5
TRIM2Q9C040 MIR1275-201ENST00000408770 80 ntBASIC5.69□□□□□ -1.5
TRIM2Q9C040 RN7SKP121-201ENST00000410842 305 ntBASIC5.69□□□□□ -1.5
TRIM2Q9C040 DHFRP2-201ENST00000414224 547 ntBASIC5.69□□□□□ -1.5
TRIM2Q9C040 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.69□□□□□ -1.5
TRIM2Q9C040 USP12PY-201ENST00000427677 1064 ntBASIC5.69□□□□□ -1.5
TRIM2Q9C040 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 AC004854.1-201ENST00000440356 349 ntBASIC5.69□□□□□ -1.5
TRIM2Q9C040 MTND1P26-201ENST00000440488 538 ntBASIC5.69□□□□□ -1.5
TRIM2Q9C040 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 CCRL1P1-201ENST00000449542 1053 ntBASIC5.69□□□□□ -1.5
TRIM2Q9C040 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM2Q9C040 RPL32P14-201ENST00000463196 378 ntBASIC5.69□□□□□ -1.5
TRIM2Q9C040 GM2AP2-201ENST00000491764 562 ntBASIC5.69□□□□□ -1.5
TRIM2Q9C040 RPL37P23-201ENST00000492641 294 ntBASIC5.69□□□□□ -1.5
TRIM2Q9C040 HMGN1P16-201ENST00000508308 283 ntBASIC5.69□□□□□ -1.5
TRIM2Q9C040 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 RN7SKP67-201ENST00000515905 235 ntBASIC5.69□□□□□ -1.5
TRIM2Q9C040 SNORA74.1-201ENST00000516320 180 ntBASIC5.69□□□□□ -1.5
TRIM2Q9C040 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 OR56A7P-201ENST00000524865 941 ntBASIC5.69□□□□□ -1.5
TRIM2Q9C040 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.69□□□□□ -1.5
TRIM2Q9C040 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 AC106730.2-201ENST00000566641 540 ntBASIC5.69□□□□□ -1.5
TRIM2Q9C040 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 MTCO3P22-201ENST00000603219 784 ntBASIC5.69□□□□□ -1.5
TRIM2Q9C040 AL096803.3-201ENST00000609032 532 ntBASIC5.69□□□□□ -1.5
TRIM2Q9C040 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.69□□□□□ -1.5
TRIM2Q9C040 AC015660.5-201ENST00000623238 564 ntBASIC5.69□□□□□ -1.5
TRIM2Q9C040 AC073342.3-201ENST00000624211 193 ntBASIC5.69□□□□□ -1.5
TRIM2Q9C040 CASC19-274ENST00000642018 970 ntBASIC5.69□□□□□ -1.5
TRIM2Q9C040 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM2Q9C040 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM2Q9C040 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM2Q9C040 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM2Q9C040 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM2Q9C040 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM2Q9C040 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM2Q9C040 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM2Q9C040 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
TRIM2Q9C040 AC004656.1-201ENST00000568479 4951 ntBASIC5.68□□□□□ -1.5
TRIM2Q9C040 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.68□□□□□ -1.5
TRIM2Q9C040 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM2Q9C040 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM2Q9C040 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
TRIM2Q9C040 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM2Q9C040 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM2Q9C040 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM2Q9C040 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM2Q9C040 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM2Q9C040 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM2Q9C040 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM2Q9C040 RNU1-49P-201ENST00000363468 159 ntBASIC5.68□□□□□ -1.5
TRIM2Q9C040 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM2Q9C040 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms