Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.89□□□□□ -1.31
RPAP1Q9BWH6 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.89□□□□□ -1.31
RPAP1Q9BWH6 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.89□□□□□ -1.31
RPAP1Q9BWH6 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RPAP1Q9BWH6 AL513327.3-201ENST00000602618 469 ntBASIC6.89□□□□□ -1.31
RPAP1Q9BWH6 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.89□□□□□ -1.31
RPAP1Q9BWH6 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RPAP1Q9BWH6 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.89□□□□□ -1.31
RPAP1Q9BWH6 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
RPAP1Q9BWH6 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RPAP1Q9BWH6 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RPAP1Q9BWH6 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 RNA5SP131-201ENST00000365452 119 ntBASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 MIR130A-201ENST00000385274 89 ntBASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 RN7SKP59-201ENST00000410520 314 ntBASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 AP000534.2-201ENST00000412729 568 ntBASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 AL390119.1-201ENST00000440329 312 ntBASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 SCARNA6.1-201ENST00000516989 238 ntBASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 AC021678.3-201ENST00000517893 476 ntBASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 HSPE1P2-201ENST00000554777 306 ntBASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 MIR4700-201ENST00000578311 74 ntBASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 AC004948.1-201ENST00000609858 672 ntBASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 PCA3_2.1-201ENST00000612507 409 ntBASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 AC009120.7-201ENST00000623452 780 ntBASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 AC004076.2-201ENST00000620532 3323 ntBASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 NCOA4P2-201ENST00000340589 1813 ntBASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 PABPC1P6-201ENST00000445594 1829 ntBASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 CASC19-260ENST00000641828 2001 ntBASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
RPAP1Q9BWH6 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 AC114774.1-201ENST00000507410 1770 ntBASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 AC006206.1-201ENST00000544842 3387 ntBASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 RNA5SP183-201ENST00000362452 119 ntBASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 NIFKP3-201ENST00000417799 865 ntBASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 AC007394.1-201ENST00000421941 531 ntBASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 REG1CP-206ENST00000447469 496 ntBASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 RPS23P9-201ENST00000448848 438 ntBASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 AC100832.1-201ENST00000471945 383 ntBASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 HIRAP1-201ENST00000605318 787 ntBASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 PPATP2-201ENST00000605635 508 ntBASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 AC008115.3-201ENST00000614874 549 ntBASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 MIR8080-201ENST00000622224 89 ntBASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 SRRM1P3-201ENST00000426911 2678 ntBASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.87□□□□□ -1.31
RPAP1Q9BWH6 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RPAP1Q9BWH6 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms