Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC7.19□□□□□ -1.26
ABCA3Q99758 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
ABCA3Q99758 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC7.19□□□□□ -1.26
ABCA3Q99758 AC092821.2-201ENST00000545710 2042 ntBASIC7.19□□□□□ -1.26
ABCA3Q99758 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.19□□□□□ -1.26
ABCA3Q99758 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC7.19□□□□□ -1.26
ABCA3Q99758 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
ABCA3Q99758 AC131649.2-201ENST00000624925 4439 ntBASIC7.19□□□□□ -1.26
ABCA3Q99758 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
ABCA3Q99758 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
ABCA3Q99758 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC7.19□□□□□ -1.26
ABCA3Q99758 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
ABCA3Q99758 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
ABCA3Q99758 SNORD8-201ENST00000363915 110 ntBASIC7.18□□□□□ -1.26
ABCA3Q99758 AL049693.1-201ENST00000402760 611 ntBASIC7.18□□□□□ -1.26
ABCA3Q99758 P2RY10P2-201ENST00000416730 913 ntBASIC7.18□□□□□ -1.26
ABCA3Q99758 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC7.18□□□□□ -1.26
ABCA3Q99758 HCG14-201ENST00000444986 413 ntTSL 2 BASIC7.18□□□□□ -1.26
ABCA3Q99758 CT45A11P-201ENST00000448043 1134 ntBASIC7.18□□□□□ -1.26
ABCA3Q99758 AL596266.1-201ENST00000448132 400 ntBASIC7.18□□□□□ -1.26
ABCA3Q99758 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC7.18□□□□□ -1.26
ABCA3Q99758 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC7.18□□□□□ -1.26
ABCA3Q99758 AC137627.1-201ENST00000545761 289 ntBASIC7.18□□□□□ -1.26
ABCA3Q99758 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
ABCA3Q99758 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
ABCA3Q99758 MEMO1P5-201ENST00000604810 406 ntBASIC7.18□□□□□ -1.26
ABCA3Q99758 EIF3FP1-201ENST00000613970 806 ntBASIC7.18□□□□□ -1.26
ABCA3Q99758 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
ABCA3Q99758 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
ABCA3Q99758 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
ABCA3Q99758 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC7.18□□□□□ -1.26
ABCA3Q99758 AC099494.2-201ENST00000623371 978 ntBASIC7.18□□□□□ -1.26
ABCA3Q99758 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC7.18□□□□□ -1.26
ABCA3Q99758 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
ABCA3Q99758 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC7.18□□□□□ -1.26
ABCA3Q99758 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC7.18□□□□□ -1.26
ABCA3Q99758 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
ABCA3Q99758 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
ABCA3Q99758 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
ABCA3Q99758 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
ABCA3Q99758 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
ABCA3Q99758 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC7.18□□□□□ -1.26
ABCA3Q99758 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
ABCA3Q99758 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
ABCA3Q99758 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
ABCA3Q99758 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
ABCA3Q99758 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
ABCA3Q99758 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
ABCA3Q99758 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC7.18□□□□□ -1.26
ABCA3Q99758 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC7.18□□□□□ -1.26
ABCA3Q99758 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC7.18□□□□□ -1.26
ABCA3Q99758 EDDM3DP-201ENST00000554692 434 ntBASIC7.18□□□□□ -1.26
ABCA3Q99758 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC7.18□□□□□ -1.26
ABCA3Q99758 RN7SL690P-201ENST00000582087 240 ntBASIC7.18□□□□□ -1.26
ABCA3Q99758 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
ABCA3Q99758 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.18□□□□□ -1.26
ABCA3Q99758 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
ABCA3Q99758 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
ABCA3Q99758 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC7.18□□□□□ -1.26
ABCA3Q99758 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
ABCA3Q99758 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC7.17□□□□□ -1.26
ABCA3Q99758 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ABCA3Q99758 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ABCA3Q99758 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ABCA3Q99758 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
ABCA3Q99758 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
ABCA3Q99758 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC7.17□□□□□ -1.26
ABCA3Q99758 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ABCA3Q99758 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.17□□□□□ -1.26
ABCA3Q99758 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC7.17□□□□□ -1.26
ABCA3Q99758 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ABCA3Q99758 AC069213.2-201ENST00000420238 366 ntBASIC7.17□□□□□ -1.26
ABCA3Q99758 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC7.17□□□□□ -1.26
ABCA3Q99758 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC7.17□□□□□ -1.26
ABCA3Q99758 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.17□□□□□ -1.26
ABCA3Q99758 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
ABCA3Q99758 PDCL3P4-201ENST00000489621 720 ntBASIC7.17□□□□□ -1.26
ABCA3Q99758 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
ABCA3Q99758 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC7.17□□□□□ -1.26
ABCA3Q99758 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
ABCA3Q99758 AC006115.2-201ENST00000596823 202 ntBASIC7.17□□□□□ -1.26
ABCA3Q99758 AC104687.2-201ENST00000604442 342 ntBASIC7.17□□□□□ -1.26
ABCA3Q99758 AC009597.2-201ENST00000604659 592 ntBASIC7.17□□□□□ -1.26
ABCA3Q99758 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ABCA3Q99758 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC7.17□□□□□ -1.26
ABCA3Q99758 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC7.17□□□□□ -1.26
ABCA3Q99758 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC7.17□□□□□ -1.26
ABCA3Q99758 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
ABCA3Q99758 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
ABCA3Q99758 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
ABCA3Q99758 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
ABCA3Q99758 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
ABCA3Q99758 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
ABCA3Q99758 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
ABCA3Q99758 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC7.17□□□□□ -1.26
ABCA3Q99758 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
ABCA3Q99758 AC006600.2-201ENST00000624834 2506 ntBASIC7.17□□□□□ -1.26
ABCA3Q99758 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
ABCA3Q99758 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
ABCA3Q99758 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms