Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC8.2□□□□□ -1.1
PHOX2BQ99453 AL353132.1-201ENST00000415260 2043 ntBASIC8.2□□□□□ -1.1
PHOX2BQ99453 AL390195.2-201ENST00000564771 2023 ntBASIC8.2□□□□□ -1.1
PHOX2BQ99453 SELENOT-202ENST00000471696 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PHOX2BQ99453 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
PHOX2BQ99453 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PHOX2BQ99453 SWT1-202ENST00000367501 3001 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
PHOX2BQ99453 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
PHOX2BQ99453 HEPACAM2-204ENST00000453812 1869 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
PHOX2BQ99453 AC011632.1-202ENST00000518128 2810 ntTSL 2 BASIC8.2□□□□□ -1.1
PHOX2BQ99453 IL2RA-202ENST00000379954 1562 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PHOX2BQ99453 UGT2B25P-201ENST00000511504 1586 ntBASIC8.2□□□□□ -1.1
PHOX2BQ99453 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PHOX2BQ99453 CNIH4-205ENST00000465271 4125 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
PHOX2BQ99453 SUN5-201ENST00000356173 1254 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
PHOX2BQ99453 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PHOX2BQ99453 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PHOX2BQ99453 TRBV10-1-201ENST00000390364 412 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
PHOX2BQ99453 GGA1-205ENST00000405147 575 ntTSL 4 BASIC8.2□□□□□ -1.1
PHOX2BQ99453 AL354719.1-201ENST00000406535 843 ntBASIC8.2□□□□□ -1.1
PHOX2BQ99453 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PHOX2BQ99453 AL136981.1-201ENST00000411450 549 ntTSL 4 BASIC8.2□□□□□ -1.1
PHOX2BQ99453 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC8.2□□□□□ -1.1
PHOX2BQ99453 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC8.2□□□□□ -1.1
PHOX2BQ99453 AL049758.1-201ENST00000423154 397 ntBASIC8.2□□□□□ -1.1
PHOX2BQ99453 SNX18P3-201ENST00000424993 835 ntBASIC8.2□□□□□ -1.1
PHOX2BQ99453 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC8.2□□□□□ -1.1
PHOX2BQ99453 CBWD4P-201ENST00000445695 655 ntBASIC8.2□□□□□ -1.1
PHOX2BQ99453 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC8.2□□□□□ -1.1
PHOX2BQ99453 RPS29P5-201ENST00000452777 171 ntBASIC8.2□□□□□ -1.1
PHOX2BQ99453 ST13P18-201ENST00000456632 1027 ntBASIC8.2□□□□□ -1.1
PHOX2BQ99453 NUTF2P4-201ENST00000458353 381 ntBASIC8.2□□□□□ -1.1
PHOX2BQ99453 AC130509.1-201ENST00000464158 433 ntBASIC8.2□□□□□ -1.1
PHOX2BQ99453 CBX5P1-201ENST00000468470 561 ntBASIC8.2□□□□□ -1.1
PHOX2BQ99453 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC8.2□□□□□ -1.1
PHOX2BQ99453 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC8.2□□□□□ -1.1
PHOX2BQ99453 SNORA81.2-201ENST00000516868 170 ntBASIC8.2□□□□□ -1.1
PHOX2BQ99453 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC8.2□□□□□ -1.1
PHOX2BQ99453 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC8.2□□□□□ -1.1
PHOX2BQ99453 AP000781.1-201ENST00000534162 311 ntTSL 3 BASIC8.2□□□□□ -1.1
PHOX2BQ99453 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC8.2□□□□□ -1.1
PHOX2BQ99453 AC008083.2-201ENST00000546707 476 ntBASIC8.2□□□□□ -1.1
PHOX2BQ99453 AC024614.1-201ENST00000577546 307 ntBASIC8.2□□□□□ -1.1
PHOX2BQ99453 RN7SL619P-201ENST00000581753 258 ntBASIC8.2□□□□□ -1.1
PHOX2BQ99453 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC8.2□□□□□ -1.1
PHOX2BQ99453 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC8.2□□□□□ -1.1
PHOX2BQ99453 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC8.2□□□□□ -1.1
PHOX2BQ99453 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC8.2□□□□□ -1.1
PHOX2BQ99453 AL161734.1-201ENST00000609720 557 ntBASIC8.2□□□□□ -1.1
PHOX2BQ99453 TEX41-254ENST00000626394 423 ntTSL 5 BASIC8.2□□□□□ -1.1
PHOX2BQ99453 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PHOX2BQ99453 DCN-220ENST00000552962 1930 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
PHOX2BQ99453 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PHOX2BQ99453 WDR44-203ENST00000371825 4029 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PHOX2BQ99453 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PHOX2BQ99453 FAM111A-202ENST00000420244 3780 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
PHOX2BQ99453 PPARG-207ENST00000397015 1722 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PHOX2BQ99453 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
PHOX2BQ99453 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PHOX2BQ99453 AP4S1-204ENST00000542754 4243 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
PHOX2BQ99453 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
PHOX2BQ99453 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC8.2□□□□□ -1.1
PHOX2BQ99453 ICE2P1-201ENST00000512800 1849 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 OFD1P5Y-201ENST00000447585 2590 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PHOX2BQ99453 LPAR6-202ENST00000378434 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PHOX2BQ99453 LIMCH1-202ENST00000381753 5705 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
PHOX2BQ99453 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PHOX2BQ99453 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC8.19□□□□□ -1.1
PHOX2BQ99453 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC8.19□□□□□ -1.1
PHOX2BQ99453 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PHOX2BQ99453 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC8.19□□□□□ -1.1
PHOX2BQ99453 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
PHOX2BQ99453 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
PHOX2BQ99453 LINC01291-201ENST00000377469 3662 ntTSL 2 BASIC8.19□□□□□ -1.1
PHOX2BQ99453 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC8.19□□□□□ -1.1
PHOX2BQ99453 TMEM108-203ENST00000508711 2470 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
PHOX2BQ99453 GNG5P1-201ENST00000255500 204 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 Y_RNA.67-201ENST00000362870 100 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 RNU6-451P-201ENST00000362921 107 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 Y_RNA.144-201ENST00000363521 113 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 RNA5SP429-201ENST00000363688 109 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 OR4K12P-201ENST00000406538 961 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
PHOX2BQ99453 OR9R1P-201ENST00000412200 877 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 VDAC1P10-201ENST00000416715 891 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC8.19□□□□□ -1.1
PHOX2BQ99453 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC8.19□□□□□ -1.1
PHOX2BQ99453 AL604028.2-201ENST00000437848 788 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 MTND6P18-201ENST00000439477 513 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 AC239860.1-201ENST00000444680 1270 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
PHOX2BQ99453 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC8.19□□□□□ -1.1
PHOX2BQ99453 AC016724.1-201ENST00000453215 421 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 MEMO1P3-201ENST00000459811 302 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 AC097493.1-201ENST00000463958 372 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 AC021660.1-201ENST00000465006 554 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 AC044810.1-201ENST00000480271 711 ntBASIC8.19□□□□□ -1.1
PHOX2BQ99453 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
PHOX2BQ99453 AC107385.1-201ENST00000507985 778 ntBASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms