Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
RFT1Q96AA3 OR9K1P-202ENST00000641111 3217 ntBASIC5.18□□□□□ -1.58
RFT1Q96AA3 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RFT1Q96AA3 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.18□□□□□ -1.58
RFT1Q96AA3 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
RFT1Q96AA3 AC130304.1-201ENST00000622942 2385 ntBASIC5.18□□□□□ -1.58
RFT1Q96AA3 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
RFT1Q96AA3 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.17□□□□□ -1.58
RFT1Q96AA3 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFT1Q96AA3 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFT1Q96AA3 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.17□□□□□ -1.58
RFT1Q96AA3 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RFT1Q96AA3 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RFT1Q96AA3 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.17□□□□□ -1.58
RFT1Q96AA3 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFT1Q96AA3 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RFT1Q96AA3 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RFT1Q96AA3 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
RFT1Q96AA3 AL132875.1-201ENST00000403623 949 ntBASIC5.17□□□□□ -1.58
RFT1Q96AA3 SETP15-201ENST00000412724 337 ntBASIC5.17□□□□□ -1.58
RFT1Q96AA3 AL096829.1-201ENST00000413677 457 ntBASIC5.17□□□□□ -1.58
RFT1Q96AA3 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.17□□□□□ -1.58
RFT1Q96AA3 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.17□□□□□ -1.58
RFT1Q96AA3 PTP4A1P1-201ENST00000420539 515 ntBASIC5.17□□□□□ -1.58
RFT1Q96AA3 RPS15AP30-201ENST00000420976 390 ntBASIC5.17□□□□□ -1.58
RFT1Q96AA3 CRIP1P1-201ENST00000427567 185 ntBASIC5.17□□□□□ -1.58
RFT1Q96AA3 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFT1Q96AA3 GAPDHP19-201ENST00000431768 1005 ntBASIC5.17□□□□□ -1.58
RFT1Q96AA3 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFT1Q96AA3 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.17□□□□□ -1.58
RFT1Q96AA3 NDUFA5P8-201ENST00000449019 346 ntBASIC5.17□□□□□ -1.58
RFT1Q96AA3 GAPDHP14-201ENST00000450472 937 ntBASIC5.17□□□□□ -1.58
RFT1Q96AA3 OR9N1P-201ENST00000491296 333 ntBASIC5.17□□□□□ -1.58
RFT1Q96AA3 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.17□□□□□ -1.58
RFT1Q96AA3 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.17□□□□□ -1.58
RFT1Q96AA3 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.17□□□□□ -1.58
RFT1Q96AA3 AK4P6-201ENST00000505168 528 ntBASIC5.17□□□□□ -1.58
RFT1Q96AA3 AC095052.1-201ENST00000509955 863 ntBASIC5.17□□□□□ -1.58
RFT1Q96AA3 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.17□□□□□ -1.58
RFT1Q96AA3 AC113191.1-201ENST00000517759 403 ntBASIC5.17□□□□□ -1.58
RFT1Q96AA3 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.17□□□□□ -1.58
RFT1Q96AA3 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.17□□□□□ -1.58
RFT1Q96AA3 AC026616.1-201ENST00000523157 525 ntBASIC5.17□□□□□ -1.58
RFT1Q96AA3 AP000859.1-201ENST00000525536 307 ntBASIC5.17□□□□□ -1.58
RFT1Q96AA3 AC090424.1-201ENST00000535243 736 ntBASIC5.17□□□□□ -1.58
RFT1Q96AA3 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.17□□□□□ -1.58
RFT1Q96AA3 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.17□□□□□ -1.58
RFT1Q96AA3 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.17□□□□□ -1.58
RFT1Q96AA3 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.17□□□□□ -1.58
RFT1Q96AA3 AP001823.1-201ENST00000604056 1003 ntBASIC5.17□□□□□ -1.58
RFT1Q96AA3 AL592494.3-201ENST00000609485 464 ntBASIC5.17□□□□□ -1.58
RFT1Q96AA3 MIR6133-201ENST00000617057 108 ntBASIC5.17□□□□□ -1.58
RFT1Q96AA3 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.17□□□□□ -1.58
RFT1Q96AA3 AC026367.3-201ENST00000619032 590 ntBASIC5.17□□□□□ -1.58
RFT1Q96AA3 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.17□□□□□ -1.58
RFT1Q96AA3 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFT1Q96AA3 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.17□□□□□ -1.58
RFT1Q96AA3 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.17□□□□□ -1.58
RFT1Q96AA3 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RFT1Q96AA3 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RFT1Q96AA3 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RFT1Q96AA3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFT1Q96AA3 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.16□□□□□ -1.58
RFT1Q96AA3 TTC39DP-201ENST00000416781 1688 ntBASIC5.16□□□□□ -1.58
RFT1Q96AA3 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFT1Q96AA3 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFT1Q96AA3 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RFT1Q96AA3 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.16□□□□□ -1.58
RFT1Q96AA3 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RFT1Q96AA3 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFT1Q96AA3 RN7SKP279-201ENST00000411383 298 ntBASIC5.16□□□□□ -1.58
RFT1Q96AA3 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.16□□□□□ -1.58
RFT1Q96AA3 OR6C64P-201ENST00000419708 825 ntBASIC5.16□□□□□ -1.58
RFT1Q96AA3 KIF4CP-201ENST00000422742 1279 ntBASIC5.16□□□□□ -1.58
RFT1Q96AA3 SETP10-201ENST00000424368 814 ntBASIC5.16□□□□□ -1.58
RFT1Q96AA3 VN1R20P-201ENST00000425215 966 ntBASIC5.16□□□□□ -1.58
RFT1Q96AA3 HSPE1P16-201ENST00000426640 348 ntBASIC5.16□□□□□ -1.58
RFT1Q96AA3 HMGN2P27-201ENST00000427352 270 ntBASIC5.16□□□□□ -1.58
RFT1Q96AA3 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.16□□□□□ -1.58
RFT1Q96AA3 ARAFP2-201ENST00000440565 559 ntBASIC5.16□□□□□ -1.58
RFT1Q96AA3 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.16□□□□□ -1.58
RFT1Q96AA3 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RFT1Q96AA3 RPS23P9-201ENST00000448848 438 ntBASIC5.16□□□□□ -1.58
RFT1Q96AA3 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.16□□□□□ -1.58
RFT1Q96AA3 MTND6P32-201ENST00000457611 483 ntBASIC5.16□□□□□ -1.58
RFT1Q96AA3 RN7SL393P-201ENST00000463588 296 ntBASIC5.16□□□□□ -1.58
RFT1Q96AA3 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.16□□□□□ -1.58
RFT1Q96AA3 SNX18P25-201ENST00000510539 758 ntBASIC5.16□□□□□ -1.58
RFT1Q96AA3 AC138517.1-201ENST00000515724 568 ntBASIC5.16□□□□□ -1.58
RFT1Q96AA3 AL671862.1-201ENST00000515851 349 ntBASIC5.16□□□□□ -1.58
RFT1Q96AA3 RN7SKP34-201ENST00000516142 244 ntBASIC5.16□□□□□ -1.58
RFT1Q96AA3 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RFT1Q96AA3 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.16□□□□□ -1.58
RFT1Q96AA3 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.16□□□□□ -1.58
RFT1Q96AA3 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RFT1Q96AA3 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.16□□□□□ -1.58
RFT1Q96AA3 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.16□□□□□ -1.58
RFT1Q96AA3 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RFT1Q96AA3 AL359219.2-201ENST00000555184 348 ntBASIC5.16□□□□□ -1.58
RFT1Q96AA3 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms