Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.39□□□□□ -1.55
PTP4A1Q93096 AC011500.1-201ENST00000601963 469 ntBASIC5.39□□□□□ -1.55
PTP4A1Q93096 WBP1LP12-201ENST00000604449 331 ntBASIC5.39□□□□□ -1.55
PTP4A1Q93096 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.39□□□□□ -1.55
PTP4A1Q93096 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.39□□□□□ -1.55
PTP4A1Q93096 AC096861.1-201ENST00000616652 240 ntBASIC5.39□□□□□ -1.55
PTP4A1Q93096 AC244100.4-201ENST00000617747 388 ntBASIC5.39□□□□□ -1.55
PTP4A1Q93096 AP003499.2-201ENST00000624100 483 ntBASIC5.39□□□□□ -1.55
PTP4A1Q93096 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.39□□□□□ -1.55
PTP4A1Q93096 THAP12P9-201ENST00000503971 2360 ntBASIC5.39□□□□□ -1.55
PTP4A1Q93096 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.39□□□□□ -1.55
PTP4A1Q93096 SSXP3-201ENST00000442971 1300 ntBASIC5.39□□□□□ -1.55
PTP4A1Q93096 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PTP4A1Q93096 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PTP4A1Q93096 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PTP4A1Q93096 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
PTP4A1Q93096 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PTP4A1Q93096 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PTP4A1Q93096 CASC19-284ENST00000642142 1868 ntBASIC5.39□□□□□ -1.55
PTP4A1Q93096 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PTP4A1Q93096 STX3-208ENST00000641815 3236 ntBASIC5.38□□□□□ -1.55
PTP4A1Q93096 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PTP4A1Q93096 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PTP4A1Q93096 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
PTP4A1Q93096 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
PTP4A1Q93096 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PTP4A1Q93096 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
PTP4A1Q93096 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.38□□□□□ -1.55
PTP4A1Q93096 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PTP4A1Q93096 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PTP4A1Q93096 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PTP4A1Q93096 RNA5SP187-201ENST00000384400 119 ntBASIC5.38□□□□□ -1.55
PTP4A1Q93096 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PTP4A1Q93096 RN7SKP144-201ENST00000411108 279 ntBASIC5.38□□□□□ -1.55
PTP4A1Q93096 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.38□□□□□ -1.55
PTP4A1Q93096 THEM7P-201ENST00000419556 672 ntBASIC5.38□□□□□ -1.55
PTP4A1Q93096 AC099782.1-201ENST00000425889 474 ntBASIC5.38□□□□□ -1.55
PTP4A1Q93096 SCAND3P1-201ENST00000439854 1060 ntBASIC5.38□□□□□ -1.55
PTP4A1Q93096 AC097359.1-201ENST00000447946 463 ntBASIC5.38□□□□□ -1.55
PTP4A1Q93096 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PTP4A1Q93096 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.38□□□□□ -1.55
PTP4A1Q93096 AC096741.1-201ENST00000472250 846 ntBASIC5.38□□□□□ -1.55
PTP4A1Q93096 H3F3AP5-201ENST00000475267 429 ntBASIC5.38□□□□□ -1.55
PTP4A1Q93096 AC098818.1-201ENST00000478593 252 ntBASIC5.38□□□□□ -1.55
PTP4A1Q93096 AC079080.1-201ENST00000479841 822 ntBASIC5.38□□□□□ -1.55
PTP4A1Q93096 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PTP4A1Q93096 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PTP4A1Q93096 BTG4P1-201ENST00000510421 183 ntBASIC5.38□□□□□ -1.55
PTP4A1Q93096 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
PTP4A1Q93096 AC078899.1-201ENST00000521432 1185 ntBASIC5.38□□□□□ -1.55
PTP4A1Q93096 AC138832.1-201ENST00000522871 556 ntBASIC5.38□□□□□ -1.55
PTP4A1Q93096 AC036111.2-201ENST00000533247 901 ntBASIC5.38□□□□□ -1.55
PTP4A1Q93096 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.38□□□□□ -1.55
PTP4A1Q93096 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.38□□□□□ -1.55
PTP4A1Q93096 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.38□□□□□ -1.55
PTP4A1Q93096 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.38□□□□□ -1.55
PTP4A1Q93096 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.38□□□□□ -1.55
PTP4A1Q93096 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PTP4A1Q93096 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PTP4A1Q93096 AC092868.3-201ENST00000560515 784 ntBASIC5.38□□□□□ -1.55
PTP4A1Q93096 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.38□□□□□ -1.55
PTP4A1Q93096 AC245128.3-201ENST00000594721 748 ntBASIC5.38□□□□□ -1.55
PTP4A1Q93096 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.38□□□□□ -1.55
PTP4A1Q93096 AL137072.1-201ENST00000603444 466 ntBASIC5.38□□□□□ -1.55
PTP4A1Q93096 AP001823.1-201ENST00000604056 1003 ntBASIC5.38□□□□□ -1.55
PTP4A1Q93096 AP004372.1-201ENST00000604842 844 ntBASIC5.38□□□□□ -1.55
PTP4A1Q93096 AC005021.1-201ENST00000608730 355 ntBASIC5.38□□□□□ -1.55
PTP4A1Q93096 AC016911.1-201ENST00000613297 452 ntBASIC5.38□□□□□ -1.55
PTP4A1Q93096 AC145207.9-201ENST00000623802 325 ntBASIC5.38□□□□□ -1.55
PTP4A1Q93096 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.38□□□□□ -1.55
PTP4A1Q93096 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PTP4A1Q93096 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.38□□□□□ -1.55
PTP4A1Q93096 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PTP4A1Q93096 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PTP4A1Q93096 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
PTP4A1Q93096 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PTP4A1Q93096 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTP4A1Q93096 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PTP4A1Q93096 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PTP4A1Q93096 KARSP1-201ENST00000451871 1752 ntBASIC5.37□□□□□ -1.55
PTP4A1Q93096 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
PTP4A1Q93096 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PTP4A1Q93096 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
PTP4A1Q93096 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTP4A1Q93096 AL591135.1-201ENST00000401578 5914 ntBASIC5.37□□□□□ -1.55
PTP4A1Q93096 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
PTP4A1Q93096 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTP4A1Q93096 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTP4A1Q93096 RN7SKP250-201ENST00000363924 321 ntBASIC5.37□□□□□ -1.55
PTP4A1Q93096 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PTP4A1Q93096 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.37□□□□□ -1.55
PTP4A1Q93096 RPS26P13-201ENST00000419030 330 ntBASIC5.37□□□□□ -1.55
PTP4A1Q93096 FAM183DP-201ENST00000421987 399 ntBASIC5.37□□□□□ -1.55
PTP4A1Q93096 AC017019.1-201ENST00000426129 261 ntBASIC5.37□□□□□ -1.55
PTP4A1Q93096 AL606490.7-201ENST00000433136 191 ntBASIC5.37□□□□□ -1.55
PTP4A1Q93096 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.37□□□□□ -1.55
PTP4A1Q93096 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.37□□□□□ -1.55
PTP4A1Q93096 CYCSP11-201ENST00000436426 315 ntBASIC5.37□□□□□ -1.55
PTP4A1Q93096 AP000936.3-201ENST00000438127 255 ntBASIC5.37□□□□□ -1.55
PTP4A1Q93096 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms