Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 RNU1-19P-201ENST00000363306 165 ntBASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 MIR105-2-201ENST00000385083 81 ntBASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 MTND4LP17-201ENST00000414607 293 ntBASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 CYCSP6-201ENST00000434498 302 ntBASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 RPS3AP38-201ENST00000435889 763 ntBASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 EEF1B2P5-201ENST00000444820 548 ntBASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 AC126177.5-201ENST00000549599 178 ntBASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 MIR4301-201ENST00000577203 66 ntBASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 AC012616.1-201ENST00000600294 197 ntBASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 AC087516.1-201ENST00000561236 2428 ntBASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SHROOM1Q2M3G4 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 AC068870.1-201ENST00000563737 2455 ntBASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 RNA5SP319-201ENST00000362768 119 ntBASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 RNA5SP514-201ENST00000363717 111 ntBASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 RNA5SP91-201ENST00000390902 119 ntBASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 AL390774.1-201ENST00000411924 246 ntBASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 TRBV5-2-201ENST00000489095 273 ntBASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 RPEP1-201ENST00000504507 658 ntBASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 AC006499.3-201ENST00000506077 748 ntBASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 AC027667.1-201ENST00000545814 304 ntBASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SHROOM1Q2M3G4 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 AC114876.1-201ENST00000490962 1366 ntBASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 AL022323.4-201ENST00000623980 13120 ntBASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 AL139148.1-201ENST00000427122 680 ntBASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 USP24P1-201ENST00000433802 779 ntBASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 OTX2P1-201ENST00000450956 354 ntBASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 OSTCP1-201ENST00000455507 450 ntBASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 RNU1-88P-201ENST00000459274 128 ntBASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 RN7SL583P-201ENST00000475692 287 ntBASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 RN7SL222P-201ENST00000476452 299 ntBASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms