Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NKX6-1P78426 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.85□□□□□ -1.47
NKX6-1P78426 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NKX6-1P78426 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.85□□□□□ -1.47
NKX6-1P78426 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC5.85□□□□□ -1.47
NKX6-1P78426 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
NKX6-1P78426 AC112484.3-201ENST00000505910 329 ntBASIC5.85□□□□□ -1.47
NKX6-1P78426 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.85□□□□□ -1.47
NKX6-1P78426 LECT2-203ENST00000512872 762 ntTSL 5 BASIC5.85□□□□□ -1.47
NKX6-1P78426 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.85□□□□□ -1.47
NKX6-1P78426 OR9L1P-201ENST00000529493 933 ntBASIC5.85□□□□□ -1.47
NKX6-1P78426 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.85□□□□□ -1.47
NKX6-1P78426 AC006518.2-201ENST00000542513 940 ntBASIC5.85□□□□□ -1.47
NKX6-1P78426 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.85□□□□□ -1.47
NKX6-1P78426 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
NKX6-1P78426 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
NKX6-1P78426 MIR4301-201ENST00000577203 66 ntBASIC5.85□□□□□ -1.47
NKX6-1P78426 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
NKX6-1P78426 CTSLP2-201ENST00000580501 394 ntBASIC5.85□□□□□ -1.47
NKX6-1P78426 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
NKX6-1P78426 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.85□□□□□ -1.47
NKX6-1P78426 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.85□□□□□ -1.47
NKX6-1P78426 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC5.85□□□□□ -1.47
NKX6-1P78426 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.85□□□□□ -1.47
NKX6-1P78426 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.85□□□□□ -1.47
NKX6-1P78426 FRG1HP-204ENST00000617940 757 ntBASIC5.85□□□□□ -1.47
NKX6-1P78426 AC006328.2-201ENST00000623198 397 ntBASIC5.85□□□□□ -1.47
NKX6-1P78426 AC012005.2-201ENST00000624333 397 ntBASIC5.85□□□□□ -1.47
NKX6-1P78426 FRG1EP-201ENST00000634469 770 ntBASIC5.85□□□□□ -1.47
NKX6-1P78426 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.85□□□□□ -1.47
NKX6-1P78426 AC111152.1-202ENST00000635848 339 ntBASIC5.85□□□□□ -1.47
NKX6-1P78426 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC5.85□□□□□ -1.47
NKX6-1P78426 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NKX6-1P78426 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NKX6-1P78426 MAPK10-261ENST00000641050 3109 ntBASIC5.85□□□□□ -1.47
NKX6-1P78426 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
NKX6-1P78426 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.85□□□□□ -1.47
NKX6-1P78426 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
NKX6-1P78426 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NKX6-1P78426 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
NKX6-1P78426 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.84□□□□□ -1.47
NKX6-1P78426 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NKX6-1P78426 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
NKX6-1P78426 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.84□□□□□ -1.47
NKX6-1P78426 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NKX6-1P78426 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NKX6-1P78426 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NKX6-1P78426 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NKX6-1P78426 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.84□□□□□ -1.47
NKX6-1P78426 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.84□□□□□ -1.47
NKX6-1P78426 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NKX6-1P78426 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NKX6-1P78426 RNA5SP433-201ENST00000364491 114 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 NOX1-203ENST00000372964 661 ntTSL 2 BASIC5.84□□□□□ -1.47
NKX6-1P78426 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NKX6-1P78426 RNY3P9-201ENST00000384727 106 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 SNORD65C-201ENST00000390962 71 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
NKX6-1P78426 RPS27AP11-201ENST00000402798 447 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.84□□□□□ -1.47
NKX6-1P78426 VTA1P1-201ENST00000414044 866 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 AC246680.2-201ENST00000422106 389 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 GPN3P1-201ENST00000423883 535 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 AC091390.2-201ENST00000432573 374 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 NANOGP9-201ENST00000439890 892 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NKX6-1P78426 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.84□□□□□ -1.47
NKX6-1P78426 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.84□□□□□ -1.47
NKX6-1P78426 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NKX6-1P78426 PTGES3P5-201ENST00000455109 434 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 RN7SL221P-201ENST00000466190 281 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.84□□□□□ -1.47
NKX6-1P78426 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NKX6-1P78426 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC5.84□□□□□ -1.47
NKX6-1P78426 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.84□□□□□ -1.47
NKX6-1P78426 AC005351.1-201ENST00000511152 786 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 SNRPCP6-201ENST00000528310 210 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 UBTFL10-201ENST00000528532 562 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.84□□□□□ -1.47
NKX6-1P78426 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC5.84□□□□□ -1.47
NKX6-1P78426 AC007068.2-201ENST00000543168 395 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 AC244502.2-201ENST00000543361 851 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC5.84□□□□□ -1.47
NKX6-1P78426 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.84□□□□□ -1.47
NKX6-1P78426 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.84□□□□□ -1.47
NKX6-1P78426 OR4U1P-201ENST00000554958 912 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 AC090888.2-201ENST00000559765 1144 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NKX6-1P78426 ATP5F1P7-201ENST00000567330 760 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 RN7SL199P-201ENST00000578752 281 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 RN7SL656P-201ENST00000579044 281 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC5.84□□□□□ -1.47
NKX6-1P78426 RN7SL270P-201ENST00000579643 281 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 RN7SL261P-201ENST00000613441 282 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.84□□□□□ -1.47
NKX6-1P78426 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.84□□□□□ -1.47
NKX6-1P78426 AC123767.1-202ENST00000620407 817 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms