Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.37□□□□□ -1.55
CDH11P55287 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH11P55287 AL133481.2-203ENST00000607558 139 ntBASIC5.37□□□□□ -1.55
CDH11P55287 AC008833.1-201ENST00000611633 691 ntBASIC5.37□□□□□ -1.55
CDH11P55287 AL356094.1-201ENST00000624663 1212 ntBASIC5.37□□□□□ -1.55
CDH11P55287 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDH11P55287 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH11P55287 OR51C1P-202ENST00000641159 1444 ntBASIC5.37□□□□□ -1.55
CDH11P55287 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CDH11P55287 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH11P55287 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDH11P55287 AC018717.1-201ENST00000457712 1505 ntBASIC5.37□□□□□ -1.55
CDH11P55287 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH11P55287 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH11P55287 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH11P55287 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH11P55287 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH11P55287 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH11P55287 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH11P55287 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH11P55287 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH11P55287 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH11P55287 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH11P55287 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH11P55287 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDH11P55287 BX276092.6-201ENST00000430476 250 ntBASIC5.36□□□□□ -1.55
CDH11P55287 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.36□□□□□ -1.55
CDH11P55287 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CDH11P55287 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH11P55287 MAPRE1P3-201ENST00000435438 796 ntBASIC5.36□□□□□ -1.55
CDH11P55287 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CDH11P55287 AC023141.3-201ENST00000436698 278 ntBASIC5.36□□□□□ -1.55
CDH11P55287 AL353662.1-201ENST00000439099 327 ntBASIC5.36□□□□□ -1.55
CDH11P55287 ATP5LP2-201ENST00000440646 311 ntBASIC5.36□□□□□ -1.55
CDH11P55287 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDH11P55287 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.36□□□□□ -1.55
CDH11P55287 BX276092.8-201ENST00000455722 250 ntBASIC5.36□□□□□ -1.55
CDH11P55287 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDH11P55287 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH11P55287 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.36□□□□□ -1.55
CDH11P55287 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH11P55287 ATG10-AS1-201ENST00000504846 648 ntBASIC5.36□□□□□ -1.55
CDH11P55287 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.36□□□□□ -1.55
CDH11P55287 NPM1P21-201ENST00000513394 762 ntBASIC5.36□□□□□ -1.55
CDH11P55287 AC111000.6-201ENST00000514471 709 ntBASIC5.36□□□□□ -1.55
CDH11P55287 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.36□□□□□ -1.55
CDH11P55287 IGKV3D-25-201ENST00000519599 235 ntBASIC5.36□□□□□ -1.55
CDH11P55287 AC104997.1-201ENST00000519761 717 ntBASIC5.36□□□□□ -1.55
CDH11P55287 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.36□□□□□ -1.55
CDH11P55287 AC010547.7-201ENST00000570323 333 ntBASIC5.36□□□□□ -1.55
CDH11P55287 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH11P55287 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.36□□□□□ -1.55
CDH11P55287 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.36□□□□□ -1.55
CDH11P55287 OR7M1P-201ENST00000608946 533 ntBASIC5.36□□□□□ -1.55
CDH11P55287 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH11P55287 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.36□□□□□ -1.55
CDH11P55287 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH11P55287 AC129778.1-202ENST00000623812 261 ntBASIC5.36□□□□□ -1.55
CDH11P55287 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH11P55287 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH11P55287 AL591379.1-207ENST00000635982 261 ntBASIC5.36□□□□□ -1.55
CDH11P55287 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.36□□□□□ -1.55
CDH11P55287 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH11P55287 AL163152.1-201ENST00000642001 374 ntBASIC5.36□□□□□ -1.55
CDH11P55287 AL929601.4-201ENST00000613011 1341 ntBASIC5.36□□□□□ -1.55
CDH11P55287 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH11P55287 AL354854.1-201ENST00000455940 1363 ntBASIC5.36□□□□□ -1.55
CDH11P55287 MTCO1P28-201ENST00000574177 1528 ntBASIC5.36□□□□□ -1.55
CDH11P55287 CASC19-238ENST00000641523 1558 ntBASIC5.36□□□□□ -1.55
CDH11P55287 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDH11P55287 AC005005.4-201ENST00000623789 16698 ntBASIC5.36□□□□□ -1.55
CDH11P55287 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH11P55287 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH11P55287 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDH11P55287 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH11P55287 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CDH11P55287 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.36□□□□□ -1.55
CDH11P55287 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH11P55287 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH11P55287 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH11P55287 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CDH11P55287 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDH11P55287 AC016745.2-201ENST00000608834 3443 ntBASIC5.35□□□□□ -1.55
CDH11P55287 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.35□□□□□ -1.55
CDH11P55287 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CDH11P55287 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDH11P55287 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDH11P55287 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDH11P55287 AC005261.6-201ENST00000623072 1387 ntBASIC5.35□□□□□ -1.55
CDH11P55287 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH11P55287 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CDH11P55287 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDH11P55287 SNORA21-201ENST00000362423 132 ntBASIC5.35□□□□□ -1.55
CDH11P55287 RNU1-134P-201ENST00000362935 165 ntBASIC5.35□□□□□ -1.55
CDH11P55287 RNA5SP211-201ENST00000365516 117 ntBASIC5.35□□□□□ -1.55
CDH11P55287 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.35□□□□□ -1.55
CDH11P55287 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
CDH11P55287 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CDH11P55287 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDH11P55287 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms