Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CKS2P33552 PWAR1-201ENST00000624188 2414 ntBASIC4.03□□□□□ -1.76
CKS2P33552 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CKS2P33552 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
CKS2P33552 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.77
CKS2P33552 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
CKS2P33552 MAPK10-320ENST00000641462 6696 ntBASIC4.02□□□□□ -1.77
CKS2P33552 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
CKS2P33552 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CKS2P33552 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CKS2P33552 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CKS2P33552 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CKS2P33552 AL731532.2-201ENST00000623542 1953 ntBASIC4.02□□□□□ -1.77
CKS2P33552 AC003973.3-201ENST00000624863 2822 ntBASIC4.02□□□□□ -1.77
CKS2P33552 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CKS2P33552 SCN1A-220ENST00000641603 12506 ntBASIC4.02□□□□□ -1.77
CKS2P33552 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
CKS2P33552 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CKS2P33552 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CKS2P33552 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CKS2P33552 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.02□□□□□ -1.77
CKS2P33552 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CKS2P33552 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CKS2P33552 RPL12P9-201ENST00000412942 488 ntBASIC4.02□□□□□ -1.77
CKS2P33552 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC4.02□□□□□ -1.77
CKS2P33552 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC4.02□□□□□ -1.77
CKS2P33552 AC073909.1-201ENST00000447112 999 ntBASIC4.02□□□□□ -1.77
CKS2P33552 AL358876.1-201ENST00000453364 1075 ntBASIC4.02□□□□□ -1.77
CKS2P33552 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.02□□□□□ -1.77
CKS2P33552 RPL5P22-201ENST00000480199 884 ntBASIC4.02□□□□□ -1.77
CKS2P33552 RN7SL570P-201ENST00000484405 292 ntBASIC4.02□□□□□ -1.77
CKS2P33552 AP002453.1-201ENST00000492327 668 ntBASIC4.02□□□□□ -1.77
CKS2P33552 AC117500.1-201ENST00000497352 755 ntBASIC4.02□□□□□ -1.77
CKS2P33552 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC4.02□□□□□ -1.77
CKS2P33552 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.02□□□□□ -1.77
CKS2P33552 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC4.02□□□□□ -1.77
CKS2P33552 AC036111.2-201ENST00000533247 901 ntBASIC4.02□□□□□ -1.77
CKS2P33552 AC084121.1-201ENST00000533882 835 ntBASIC4.02□□□□□ -1.77
CKS2P33552 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.02□□□□□ -1.77
CKS2P33552 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC4.02□□□□□ -1.77
CKS2P33552 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.02□□□□□ -1.77
CKS2P33552 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CKS2P33552 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC4.02□□□□□ -1.77
CKS2P33552 AC096996.1-201ENST00000563813 325 ntBASIC4.02□□□□□ -1.77
CKS2P33552 MIR4311-201ENST00000580794 100 ntBASIC4.02□□□□□ -1.77
CKS2P33552 MIR3936-201ENST00000584304 110 ntBASIC4.02□□□□□ -1.77
CKS2P33552 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC4.02□□□□□ -1.77
CKS2P33552 AC073333.2-201ENST00000603589 769 ntBASIC4.02□□□□□ -1.77
CKS2P33552 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.02□□□□□ -1.77
CKS2P33552 AC068726.1-201ENST00000610993 341 ntBASIC4.02□□□□□ -1.77
CKS2P33552 MIR6731-201ENST00000614863 72 ntBASIC4.02□□□□□ -1.77
CKS2P33552 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.02□□□□□ -1.77
CKS2P33552 MRRFP1-201ENST00000435941 1675 ntBASIC4.02□□□□□ -1.77
CKS2P33552 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.02□□□□□ -1.77
CKS2P33552 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CKS2P33552 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
CKS2P33552 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CKS2P33552 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CKS2P33552 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CKS2P33552 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.02□□□□□ -1.77
CKS2P33552 AC007842.1-201ENST00000597336 2039 ntBASIC4.02□□□□□ -1.77
CKS2P33552 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
CKS2P33552 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
CKS2P33552 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CKS2P33552 AC116158.1-201ENST00000560231 2129 ntBASIC4.01□□□□□ -1.77
CKS2P33552 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CKS2P33552 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CKS2P33552 AC000374.1-201ENST00000434698 1745 ntBASIC4.01□□□□□ -1.77
CKS2P33552 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CKS2P33552 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CKS2P33552 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CKS2P33552 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.01□□□□□ -1.77
CKS2P33552 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
CKS2P33552 AC025574.1-201ENST00000554784 1653 ntBASIC4.01□□□□□ -1.77
CKS2P33552 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
CKS2P33552 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CKS2P33552 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CKS2P33552 RNU1-19P-201ENST00000363306 165 ntBASIC4.01□□□□□ -1.77
CKS2P33552 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CKS2P33552 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CKS2P33552 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
CKS2P33552 AL009179.1-201ENST00000406085 265 ntBASIC4.01□□□□□ -1.77
CKS2P33552 AL357752.1-201ENST00000412817 349 ntBASIC4.01□□□□□ -1.77
CKS2P33552 RPS6P23-201ENST00000413224 722 ntBASIC4.01□□□□□ -1.77
CKS2P33552 OR52N3P-201ENST00000413417 934 ntBASIC4.01□□□□□ -1.77
CKS2P33552 MRPL53P1-201ENST00000414323 319 ntBASIC4.01□□□□□ -1.77
CKS2P33552 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.01□□□□□ -1.77
CKS2P33552 RPL6P21-201ENST00000418672 846 ntBASIC4.01□□□□□ -1.77
CKS2P33552 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.01□□□□□ -1.77
CKS2P33552 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC4.01□□□□□ -1.77
CKS2P33552 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
CKS2P33552 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC4.01□□□□□ -1.77
CKS2P33552 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.01□□□□□ -1.77
CKS2P33552 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CKS2P33552 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CKS2P33552 AL596266.1-201ENST00000448132 400 ntBASIC4.01□□□□□ -1.77
CKS2P33552 EIF3LP2-201ENST00000457262 807 ntBASIC4.01□□□□□ -1.77
CKS2P33552 RPS7P10-201ENST00000464254 603 ntBASIC4.01□□□□□ -1.77
CKS2P33552 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CKS2P33552 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms