Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PTPRMP28827 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC8.1□□□□□ -1.11
PTPRMP28827 RN7SKP227-201ENST00000364445 330 ntBASIC8.1□□□□□ -1.11
PTPRMP28827 RNA5SP515-201ENST00000364570 118 ntBASIC8.1□□□□□ -1.11
PTPRMP28827 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC8.1□□□□□ -1.11
PTPRMP28827 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC8.1□□□□□ -1.11
PTPRMP28827 CCNB1IP1P2-201ENST00000432876 818 ntBASIC8.1□□□□□ -1.11
PTPRMP28827 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC8.1□□□□□ -1.11
PTPRMP28827 CT45A11P-201ENST00000448043 1134 ntBASIC8.1□□□□□ -1.11
PTPRMP28827 RN7SL352P-201ENST00000466002 277 ntBASIC8.1□□□□□ -1.11
PTPRMP28827 AC034236.1-201ENST00000469891 373 ntBASIC8.1□□□□□ -1.11
PTPRMP28827 RN7SKP288-201ENST00000516227 268 ntBASIC8.1□□□□□ -1.11
PTPRMP28827 IGHVII-44-2-201ENST00000517728 250 ntBASIC8.1□□□□□ -1.11
PTPRMP28827 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PTPRMP28827 AL445423.1-201ENST00000609941 536 ntBASIC8.1□□□□□ -1.11
PTPRMP28827 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
PTPRMP28827 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PTPRMP28827 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
PTPRMP28827 THAP12P4-201ENST00000528321 2266 ntBASIC8.1□□□□□ -1.11
PTPRMP28827 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PTPRMP28827 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC8.09□□□□□ -1.11
PTPRMP28827 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC8.09□□□□□ -1.11
PTPRMP28827 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PTPRMP28827 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PTPRMP28827 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
PTPRMP28827 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
PTPRMP28827 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC8.09□□□□□ -1.11
PTPRMP28827 RN7SKP151-201ENST00000410230 316 ntBASIC8.09□□□□□ -1.11
PTPRMP28827 AC007568.1-201ENST00000422912 471 ntBASIC8.09□□□□□ -1.11
PTPRMP28827 AL731534.1-201ENST00000434711 269 ntBASIC8.09□□□□□ -1.11
PTPRMP28827 AL590399.4-201ENST00000436561 601 ntBASIC8.09□□□□□ -1.11
PTPRMP28827 OR11I1P-201ENST00000486033 954 ntBASIC8.09□□□□□ -1.11
PTPRMP28827 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC8.09□□□□□ -1.11
PTPRMP28827 FTH1P8-201ENST00000498161 514 ntBASIC8.09□□□□□ -1.11
PTPRMP28827 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC8.09□□□□□ -1.11
PTPRMP28827 IGLV3-24-201ENST00000517477 197 ntBASIC8.09□□□□□ -1.11
PTPRMP28827 GLRXP2-201ENST00000555594 321 ntBASIC8.09□□□□□ -1.11
PTPRMP28827 AL034374.2-201ENST00000605281 548 ntBASIC8.09□□□□□ -1.11
PTPRMP28827 AC135068.12-201ENST00000637370 931 ntBASIC8.09□□□□□ -1.11
PTPRMP28827 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
PTPRMP28827 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
PTPRMP28827 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PTPRMP28827 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
PTPRMP28827 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
PTPRMP28827 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC8.08□□□□□ -1.12
PTPRMP28827 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
PTPRMP28827 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
PTPRMP28827 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
PTPRMP28827 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
PTPRMP28827 AC008171.1-201ENST00000395058 200 ntBASIC8.08□□□□□ -1.12
PTPRMP28827 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
PTPRMP28827 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC8.08□□□□□ -1.12
PTPRMP28827 CHIAP3-201ENST00000423668 1133 ntBASIC8.08□□□□□ -1.12
PTPRMP28827 AK3P5-201ENST00000432033 519 ntBASIC8.08□□□□□ -1.12
PTPRMP28827 RHOT1P3-201ENST00000436571 331 ntBASIC8.08□□□□□ -1.12
PTPRMP28827 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC8.08□□□□□ -1.12
PTPRMP28827 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC8.08□□□□□ -1.12
PTPRMP28827 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC8.08□□□□□ -1.12
PTPRMP28827 RPL7L1P3-201ENST00000455249 689 ntBASIC8.08□□□□□ -1.12
PTPRMP28827 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC8.08□□□□□ -1.12
PTPRMP28827 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC8.08□□□□□ -1.12
PTPRMP28827 AL049779.3-201ENST00000557141 606 ntBASIC8.08□□□□□ -1.12
PTPRMP28827 AC067852.5-201ENST00000589299 310 ntBASIC8.08□□□□□ -1.12
PTPRMP28827 CYCSP1-201ENST00000604815 315 ntBASIC8.08□□□□□ -1.12
PTPRMP28827 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC8.08□□□□□ -1.12
PTPRMP28827 AC004836.1-201ENST00000623032 634 ntBASIC8.08□□□□□ -1.12
PTPRMP28827 AC092724.1-201ENST00000624623 3397 ntBASIC8.08□□□□□ -1.12
PTPRMP28827 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC8.08□□□□□ -1.12
PTPRMP28827 AC074101.1-201ENST00000637861 241 ntBASIC8.08□□□□□ -1.12
PTPRMP28827 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
PTPRMP28827 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
PTPRMP28827 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
PTPRMP28827 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
PTPRMP28827 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
PTPRMP28827 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
PTPRMP28827 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PTPRMP28827 OR4K12P-201ENST00000406538 961 ntBASIC8.07□□□□□ -1.12
PTPRMP28827 SNORA11F-201ENST00000408237 128 ntBASIC8.07□□□□□ -1.12
PTPRMP28827 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC8.07□□□□□ -1.12
PTPRMP28827 AC069213.2-201ENST00000420238 366 ntBASIC8.07□□□□□ -1.12
PTPRMP28827 AC016027.5-201ENST00000427227 210 ntBASIC8.07□□□□□ -1.12
PTPRMP28827 HSPD1P12-201ENST00000429127 1069 ntBASIC8.07□□□□□ -1.12
PTPRMP28827 CDC27P1-201ENST00000445384 715 ntBASIC8.07□□□□□ -1.12
PTPRMP28827 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC8.07□□□□□ -1.12
PTPRMP28827 AC105384.2-201ENST00000508433 640 ntBASIC8.07□□□□□ -1.12
PTPRMP28827 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC8.07□□□□□ -1.12
PTPRMP28827 MIR4691-201ENST00000583764 85 ntBASIC8.07□□□□□ -1.12
PTPRMP28827 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC8.07□□□□□ -1.12
PTPRMP28827 ASNSP1-204ENST00000641977 1664 ntBASIC8.07□□□□□ -1.12
PTPRMP28827 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
PTPRMP28827 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PTPRMP28827 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PTPRMP28827 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC8.07□□□□□ -1.12
PTPRMP28827 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PTPRMP28827 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
PTPRMP28827 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC8.07□□□□□ -1.12
PTPRMP28827 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PTPRMP28827 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PTPRMP28827 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
PTPRMP28827 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC8.07□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms