Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RETP07949 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
RETP07949 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.92□□□□□ -1.46
RETP07949 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.91□□□□□ -1.46
RETP07949 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
RETP07949 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RETP07949 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.91□□□□□ -1.46
RETP07949 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RETP07949 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RETP07949 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
RETP07949 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RETP07949 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RETP07949 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.91□□□□□ -1.46
RETP07949 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RETP07949 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.91□□□□□ -1.46
RETP07949 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
RETP07949 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.91□□□□□ -1.46
RETP07949 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.91□□□□□ -1.46
RETP07949 CNOT7P2-201ENST00000441051 832 ntBASIC5.91□□□□□ -1.46
RETP07949 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.91□□□□□ -1.46
RETP07949 AC073850.1-201ENST00000449243 255 ntBASIC5.91□□□□□ -1.46
RETP07949 snoU13.29-201ENST00000459370 104 ntBASIC5.91□□□□□ -1.46
RETP07949 RN7SL172P-201ENST00000460535 303 ntBASIC5.91□□□□□ -1.46
RETP07949 RN7SL72P-201ENST00000460697 269 ntBASIC5.91□□□□□ -1.46
RETP07949 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
RETP07949 AC022215.1-201ENST00000481770 362 ntBASIC5.91□□□□□ -1.46
RETP07949 OR7E157P-201ENST00000494376 911 ntBASIC5.91□□□□□ -1.46
RETP07949 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.91□□□□□ -1.46
RETP07949 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.91□□□□□ -1.46
RETP07949 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.91□□□□□ -1.46
RETP07949 OR6M2P-201ENST00000529831 871 ntBASIC5.91□□□□□ -1.46
RETP07949 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.91□□□□□ -1.46
RETP07949 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RETP07949 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.91□□□□□ -1.46
RETP07949 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.91□□□□□ -1.46
RETP07949 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.91□□□□□ -1.46
RETP07949 AL121612.2-201ENST00000612261 482 ntBASIC5.91□□□□□ -1.46
RETP07949 AC068870.2-201ENST00000620635 389 ntBASIC5.91□□□□□ -1.46
RETP07949 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RETP07949 PARP4P2-201ENST00000446672 3326 ntBASIC5.91□□□□□ -1.46
RETP07949 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RETP07949 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
RETP07949 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RETP07949 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.91□□□□□ -1.46
RETP07949 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.91□□□□□ -1.46
RETP07949 HDAC1P2-201ENST00000453661 1398 ntBASIC5.91□□□□□ -1.46
RETP07949 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
RETP07949 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RETP07949 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RETP07949 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
RETP07949 AL161756.3-201ENST00000641216 2071 ntBASIC5.9□□□□□ -1.46
RETP07949 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
RETP07949 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RETP07949 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.9□□□□□ -1.46
RETP07949 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.9□□□□□ -1.46
RETP07949 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
RETP07949 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RETP07949 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RETP07949 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
RETP07949 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
RETP07949 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.9□□□□□ -1.46
RETP07949 MIR550A3-201ENST00000390735 95 ntBASIC5.9□□□□□ -1.46
RETP07949 PEX12P1-201ENST00000400284 1048 ntBASIC5.9□□□□□ -1.46
RETP07949 AC009804.1-201ENST00000400949 179 ntBASIC5.9□□□□□ -1.46
RETP07949 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RETP07949 AL022331.1-201ENST00000429025 477 ntBASIC5.9□□□□□ -1.46
RETP07949 FABP7P2-201ENST00000429946 379 ntBASIC5.9□□□□□ -1.46
RETP07949 RPS23P6-201ENST00000466136 431 ntBASIC5.9□□□□□ -1.46
RETP07949 AC099521.1-201ENST00000482557 334 ntBASIC5.9□□□□□ -1.46
RETP07949 RN7SL547P-201ENST00000490793 290 ntBASIC5.9□□□□□ -1.46
RETP07949 AC008953.1-201ENST00000497334 318 ntBASIC5.9□□□□□ -1.46
RETP07949 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.9□□□□□ -1.46
RETP07949 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.9□□□□□ -1.46
RETP07949 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.9□□□□□ -1.46
RETP07949 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
RETP07949 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.9□□□□□ -1.46
RETP07949 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.9□□□□□ -1.46
RETP07949 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.9□□□□□ -1.46
RETP07949 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
RETP07949 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.9□□□□□ -1.46
RETP07949 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.9□□□□□ -1.46
RETP07949 AC004890.3-201ENST00000605566 1095 ntBASIC5.9□□□□□ -1.46
RETP07949 AC093388.1-201ENST00000609166 430 ntBASIC5.9□□□□□ -1.46
RETP07949 MIR6820-201ENST00000611508 62 ntBASIC5.9□□□□□ -1.46
RETP07949 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.9□□□□□ -1.46
RETP07949 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.9□□□□□ -1.46
RETP07949 OR7A1P-202ENST00000641542 1158 ntBASIC5.9□□□□□ -1.46
RETP07949 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RETP07949 AC007842.1-201ENST00000597336 2039 ntBASIC5.9□□□□□ -1.47
RETP07949 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
RETP07949 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.47
RETP07949 AL121768.1-201ENST00000613917 2544 ntBASIC5.9□□□□□ -1.47
RETP07949 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.9□□□□□ -1.47
RETP07949 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RETP07949 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.9□□□□□ -1.47
RETP07949 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RETP07949 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
RETP07949 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.89□□□□□ -1.47
RETP07949 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RETP07949 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms