Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 UGT2B24P-201ENST00000514441 1597 ntBASIC6.57□□□□□ -1.36
COL4A1P02462 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.57□□□□□ -1.36
COL4A1P02462 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A1P02462 AC107980.1-201ENST00000558671 3355 ntBASIC6.57□□□□□ -1.36
COL4A1P02462 AC007114.2-201ENST00000576014 4281 ntBASIC6.57□□□□□ -1.36
COL4A1P02462 AC100757.1-201ENST00000616872 1835 ntBASIC6.57□□□□□ -1.36
COL4A1P02462 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC6.57□□□□□ -1.36
COL4A1P02462 AC131971.1-201ENST00000332881 1482 ntBASIC6.57□□□□□ -1.36
COL4A1P02462 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL4A1P02462 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.57□□□□□ -1.36
COL4A1P02462 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL4A1P02462 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL4A1P02462 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC6.56□□□□□ -1.36
COL4A1P02462 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL4A1P02462 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.56□□□□□ -1.36
COL4A1P02462 AL117378.2-201ENST00000622916 1337 ntBASIC6.56□□□□□ -1.36
COL4A1P02462 SNORA51.8-201ENST00000384234 132 ntBASIC6.56□□□□□ -1.36
COL4A1P02462 OR10T1P-201ENST00000424327 947 ntBASIC6.56□□□□□ -1.36
COL4A1P02462 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.56□□□□□ -1.36
COL4A1P02462 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.56□□□□□ -1.36
COL4A1P02462 RPS3AP53-201ENST00000454716 778 ntBASIC6.56□□□□□ -1.36
COL4A1P02462 EIF3KP3-201ENST00000514461 639 ntBASIC6.56□□□□□ -1.36
COL4A1P02462 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.56□□□□□ -1.36
COL4A1P02462 AC060780.2-201ENST00000589047 198 ntBASIC6.56□□□□□ -1.36
COL4A1P02462 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.56□□□□□ -1.36
COL4A1P02462 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
COL4A1P02462 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL4A1P02462 AL359715.3-201ENST00000569267 2123 ntBASIC6.56□□□□□ -1.36
COL4A1P02462 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL4A1P02462 AC003973.3-201ENST00000624863 2822 ntBASIC6.56□□□□□ -1.36
COL4A1P02462 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.56□□□□□ -1.36
COL4A1P02462 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL4A1P02462 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL4A1P02462 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL4A1P02462 AC006600.2-201ENST00000624834 2506 ntBASIC6.56□□□□□ -1.36
COL4A1P02462 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL4A1P02462 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
COL4A1P02462 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.56□□□□□ -1.36
COL4A1P02462 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.56□□□□□ -1.36
COL4A1P02462 IRF5P1-201ENST00000504852 2164 ntBASIC6.55□□□□□ -1.36
COL4A1P02462 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL4A1P02462 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
COL4A1P02462 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL4A1P02462 MIR105-1-201ENST00000385222 81 ntBASIC6.55□□□□□ -1.36
COL4A1P02462 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
COL4A1P02462 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.55□□□□□ -1.36
COL4A1P02462 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.55□□□□□ -1.36
COL4A1P02462 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.55□□□□□ -1.36
COL4A1P02462 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.55□□□□□ -1.36
COL4A1P02462 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC6.55□□□□□ -1.36
COL4A1P02462 GAPDHP62-201ENST00000515313 990 ntBASIC6.55□□□□□ -1.36
COL4A1P02462 SCARNA20.4-201ENST00000516969 131 ntBASIC6.55□□□□□ -1.36
COL4A1P02462 AC130364.2-201ENST00000528639 604 ntBASIC6.55□□□□□ -1.36
COL4A1P02462 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.55□□□□□ -1.36
COL4A1P02462 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.55□□□□□ -1.36
COL4A1P02462 AC108738.1-201ENST00000603703 237 ntBASIC6.55□□□□□ -1.36
COL4A1P02462 WBP1LP8-201ENST00000617401 327 ntBASIC6.55□□□□□ -1.36
COL4A1P02462 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.55□□□□□ -1.36
COL4A1P02462 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL4A1P02462 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.55□□□□□ -1.36
COL4A1P02462 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.55□□□□□ -1.36
COL4A1P02462 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL4A1P02462 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL4A1P02462 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL4A1P02462 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
COL4A1P02462 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.55□□□□□ -1.36
COL4A1P02462 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.55□□□□□ -1.36
COL4A1P02462 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL4A1P02462 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
COL4A1P02462 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL4A1P02462 U3.10-201ENST00000364459 214 ntBASIC6.55□□□□□ -1.36
COL4A1P02462 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC6.55□□□□□ -1.36
COL4A1P02462 RPL7P56-201ENST00000429441 717 ntBASIC6.55□□□□□ -1.36
COL4A1P02462 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.55□□□□□ -1.36
COL4A1P02462 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.55□□□□□ -1.36
COL4A1P02462 CEACAMP7-201ENST00000444105 496 ntBASIC6.55□□□□□ -1.36
COL4A1P02462 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.55□□□□□ -1.36
COL4A1P02462 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
COL4A1P02462 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.55□□□□□ -1.36
COL4A1P02462 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.55□□□□□ -1.36
COL4A1P02462 AC060766.1-201ENST00000590824 627 ntBASIC6.55□□□□□ -1.36
COL4A1P02462 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.55□□□□□ -1.36
COL4A1P02462 AC093799.2-201ENST00000610062 578 ntBASIC6.55□□□□□ -1.36
COL4A1P02462 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL4A1P02462 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
COL4A1P02462 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
COL4A1P02462 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL4A1P02462 AC104581.5-201ENST00000624171 7141 ntBASIC6.55□□□□□ -1.36
COL4A1P02462 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
COL4A1P02462 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
COL4A1P02462 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC6.54□□□□□ -1.36
COL4A1P02462 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.54□□□□□ -1.36
COL4A1P02462 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL4A1P02462 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC6.54□□□□□ -1.36
COL4A1P02462 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC6.54□□□□□ -1.36
COL4A1P02462 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL4A1P02462 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL4A1P02462 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
COL4A1P02462 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
COL4A1P02462 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms