Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL2A1P02458 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.51□□□□□ -1.37
COL2A1P02458 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL2A1P02458 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.51□□□□□ -1.37
COL2A1P02458 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
COL2A1P02458 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
COL2A1P02458 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.51□□□□□ -1.37
COL2A1P02458 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.51□□□□□ -1.37
COL2A1P02458 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL2A1P02458 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL2A1P02458 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL2A1P02458 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
COL2A1P02458 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL2A1P02458 AL162456.1-201ENST00000634535 2006 ntBASIC6.51□□□□□ -1.37
COL2A1P02458 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
COL2A1P02458 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
COL2A1P02458 RN7SKP213-201ENST00000410746 298 ntBASIC6.51□□□□□ -1.37
COL2A1P02458 RPS26P38-201ENST00000414476 348 ntBASIC6.51□□□□□ -1.37
COL2A1P02458 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.51□□□□□ -1.37
COL2A1P02458 DNAJB5P1-201ENST00000454004 806 ntBASIC6.51□□□□□ -1.37
COL2A1P02458 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.51□□□□□ -1.37
COL2A1P02458 RPSAP50-201ENST00000481955 852 ntBASIC6.51□□□□□ -1.37
COL2A1P02458 RN7SKP99-201ENST00000517028 307 ntBASIC6.51□□□□□ -1.37
COL2A1P02458 HMGB1P40-201ENST00000525121 540 ntBASIC6.51□□□□□ -1.37
COL2A1P02458 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL2A1P02458 ZNF812P-201ENST00000457674 1694 ntBASIC6.51□□□□□ -1.37
COL2A1P02458 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.51□□□□□ -1.37
COL2A1P02458 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL2A1P02458 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL2A1P02458 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
COL2A1P02458 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL2A1P02458 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
COL2A1P02458 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.5□□□□□ -1.37
COL2A1P02458 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
COL2A1P02458 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL2A1P02458 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
COL2A1P02458 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL2A1P02458 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL2A1P02458 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL2A1P02458 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL2A1P02458 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.5□□□□□ -1.37
COL2A1P02458 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL2A1P02458 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC6.5□□□□□ -1.37
COL2A1P02458 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL2A1P02458 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL2A1P02458 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
COL2A1P02458 AL645733.1-201ENST00000402250 217 ntBASIC6.5□□□□□ -1.37
COL2A1P02458 AL009179.1-201ENST00000406085 265 ntBASIC6.5□□□□□ -1.37
COL2A1P02458 AL139128.1-201ENST00000413921 941 ntBASIC6.5□□□□□ -1.37
COL2A1P02458 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.5□□□□□ -1.37
COL2A1P02458 MTND6P2-201ENST00000512226 524 ntBASIC6.5□□□□□ -1.37
COL2A1P02458 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.5□□□□□ -1.37
COL2A1P02458 MIR4436B2-201ENST00000581415 91 ntBASIC6.5□□□□□ -1.37
COL2A1P02458 MIR4436B1-201ENST00000583272 91 ntBASIC6.5□□□□□ -1.37
COL2A1P02458 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.5□□□□□ -1.37
COL2A1P02458 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
COL2A1P02458 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.5□□□□□ -1.37
COL2A1P02458 uc_338.18-201ENST00000615451 175 ntBASIC6.5□□□□□ -1.37
COL2A1P02458 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.5□□□□□ -1.37
COL2A1P02458 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
COL2A1P02458 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL2A1P02458 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL2A1P02458 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.5□□□□□ -1.37
COL2A1P02458 AC022164.1-201ENST00000568767 2673 ntBASIC6.5□□□□□ -1.37
COL2A1P02458 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.5□□□□□ -1.37
COL2A1P02458 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.5□□□□□ -1.37
COL2A1P02458 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.5□□□□□ -1.37
COL2A1P02458 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL2A1P02458 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
COL2A1P02458 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL2A1P02458 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.49□□□□□ -1.37
COL2A1P02458 SNORA16A-201ENST00000384342 137 ntBASIC6.49□□□□□ -1.37
COL2A1P02458 RNU1-106P-201ENST00000384382 164 ntBASIC6.49□□□□□ -1.37
COL2A1P02458 SNORA67-201ENST00000384423 137 ntBASIC6.49□□□□□ -1.37
COL2A1P02458 AL589647.1-201ENST00000402485 466 ntBASIC6.49□□□□□ -1.37
COL2A1P02458 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.49□□□□□ -1.37
COL2A1P02458 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.49□□□□□ -1.37
COL2A1P02458 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.49□□□□□ -1.37
COL2A1P02458 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.49□□□□□ -1.37
COL2A1P02458 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.49□□□□□ -1.37
COL2A1P02458 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.49□□□□□ -1.37
COL2A1P02458 AL389915.2-201ENST00000454576 441 ntBASIC6.49□□□□□ -1.37
COL2A1P02458 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.49□□□□□ -1.37
COL2A1P02458 RPS29P22-201ENST00000472363 168 ntBASIC6.49□□□□□ -1.37
COL2A1P02458 AC015864.1-201ENST00000496512 544 ntBASIC6.49□□□□□ -1.37
COL2A1P02458 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.49□□□□□ -1.37
COL2A1P02458 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.49□□□□□ -1.37
COL2A1P02458 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.49□□□□□ -1.37
COL2A1P02458 AP001804.1-201ENST00000526868 919 ntBASIC6.49□□□□□ -1.37
COL2A1P02458 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.49□□□□□ -1.37
COL2A1P02458 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL2A1P02458 AC069307.1-201ENST00000602820 447 ntBASIC6.49□□□□□ -1.37
COL2A1P02458 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.49□□□□□ -1.37
COL2A1P02458 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
COL2A1P02458 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL2A1P02458 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
COL2A1P02458 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
COL2A1P02458 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
COL2A1P02458 AC005225.5-201ENST00000623547 2225 ntBASIC6.49□□□□□ -1.37
COL2A1P02458 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 207.7 ms