Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 RNA5SP85-201ENST00000365378 119 ntBASIC4.24□□□□□ -1.73
HLA-DQA1P01909 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 AL096829.1-201ENST00000413677 457 ntBASIC4.24□□□□□ -1.73
HLA-DQA1P01909 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 THEM7P-201ENST00000419556 672 ntBASIC4.24□□□□□ -1.73
HLA-DQA1P01909 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 OR6R1P-201ENST00000431838 940 ntBASIC4.24□□□□□ -1.73
HLA-DQA1P01909 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 AC112492.2-201ENST00000432774 1030 ntBASIC4.24□□□□□ -1.73
HLA-DQA1P01909 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 BMS1P10-201ENST00000443754 1120 ntBASIC4.24□□□□□ -1.73
HLA-DQA1P01909 CYCSP24-201ENST00000445119 316 ntBASIC4.24□□□□□ -1.73
HLA-DQA1P01909 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 HIGD1AP16-201ENST00000450986 258 ntBASIC4.24□□□□□ -1.73
HLA-DQA1P01909 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 NXT1P1-201ENST00000458481 316 ntBASIC4.24□□□□□ -1.73
HLA-DQA1P01909 AC004890.1-201ENST00000461005 181 ntBASIC4.24□□□□□ -1.73
HLA-DQA1P01909 RPL5P22-201ENST00000480199 884 ntBASIC4.24□□□□□ -1.73
HLA-DQA1P01909 AC044810.1-201ENST00000480271 711 ntBASIC4.24□□□□□ -1.73
HLA-DQA1P01909 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 SNRPCP11-201ENST00000492453 205 ntBASIC4.24□□□□□ -1.73
HLA-DQA1P01909 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 BLNK-209ENST00000495266 440 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 AC114324.2-202ENST00000503812 134 ntBASIC4.24□□□□□ -1.73
HLA-DQA1P01909 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 RNU6-1334P-201ENST00000516032 105 ntBASIC4.24□□□□□ -1.73
HLA-DQA1P01909 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 TDGP1-201ENST00000543961 1229 ntBASIC4.24□□□□□ -1.73
HLA-DQA1P01909 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 MIR744-201ENST00000578242 98 ntBASIC4.24□□□□□ -1.73
HLA-DQA1P01909 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 AC068726.1-201ENST00000610993 341 ntBASIC4.24□□□□□ -1.73
HLA-DQA1P01909 AL354950.1-201ENST00000614150 568 ntBASIC4.24□□□□□ -1.73
HLA-DQA1P01909 AC096861.1-201ENST00000616652 240 ntBASIC4.24□□□□□ -1.73
HLA-DQA1P01909 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 MIR6811-201ENST00000620409 58 ntBASIC4.24□□□□□ -1.73
HLA-DQA1P01909 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 AC024884.1-201ENST00000620583 399 ntBASIC4.24□□□□□ -1.73
HLA-DQA1P01909 uc_338.7-201ENST00000621834 124 ntBASIC4.24□□□□□ -1.73
HLA-DQA1P01909 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 AL359715.3-201ENST00000569267 2123 ntBASIC4.24□□□□□ -1.73
HLA-DQA1P01909 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HLA-DQA1P01909 AL034549.2-201ENST00000618285 3373 ntBASIC4.23□□□□□ -1.73
HLA-DQA1P01909 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DQA1P01909 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
HLA-DQA1P01909 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DQA1P01909 AC011447.7-201ENST00000624228 1590 ntBASIC4.23□□□□□ -1.73
HLA-DQA1P01909 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.23□□□□□ -1.73
HLA-DQA1P01909 AC007996.1-201ENST00000620414 2821 ntBASIC4.23□□□□□ -1.73
HLA-DQA1P01909 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DQA1P01909 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DQA1P01909 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DQA1P01909 OR1L6-202ENST00000373684 1044 ntBASIC4.23□□□□□ -1.73
HLA-DQA1P01909 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DQA1P01909 AC005042.1-201ENST00000393397 800 ntBASIC4.23□□□□□ -1.73
HLA-DQA1P01909 RNA5SP156-201ENST00000410250 110 ntBASIC4.23□□□□□ -1.73
HLA-DQA1P01909 RN7SKP38-201ENST00000410782 309 ntBASIC4.23□□□□□ -1.73
HLA-DQA1P01909 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.23□□□□□ -1.73
HLA-DQA1P01909 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.23□□□□□ -1.73
HLA-DQA1P01909 AC002127.1-201ENST00000421305 225 ntBASIC4.23□□□□□ -1.73
HLA-DQA1P01909 AL354893.1-201ENST00000433735 348 ntBASIC4.23□□□□□ -1.73
HLA-DQA1P01909 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DQA1P01909 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DQA1P01909 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DQA1P01909 OR7E116P-201ENST00000448529 957 ntBASIC4.23□□□□□ -1.73
HLA-DQA1P01909 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DQA1P01909 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DQA1P01909 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DQA1P01909 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DQA1P01909 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.23□□□□□ -1.73
HLA-DQA1P01909 RN7SL346P-201ENST00000491561 294 ntBASIC4.23□□□□□ -1.73
HLA-DQA1P01909 AC112184.1-201ENST00000505179 312 ntBASIC4.23□□□□□ -1.73
HLA-DQA1P01909 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC4.23□□□□□ -1.73
HLA-DQA1P01909 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DQA1P01909 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HLA-DQA1P01909 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC4.23□□□□□ -1.73
HLA-DQA1P01909 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.23□□□□□ -1.73
HLA-DQA1P01909 BNIP3P1-201ENST00000547295 580 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms