Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC188H7C350 AL357752.1-201ENST00000412817 349 ntBASIC5.88□□□□□ -1.47
CCDC188H7C350 RAB9AP4-201ENST00000415230 609 ntBASIC5.88□□□□□ -1.47
CCDC188H7C350 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC188H7C350 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC188H7C350 HMGN2P27-201ENST00000427352 270 ntBASIC5.88□□□□□ -1.47
CCDC188H7C350 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC188H7C350 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.88□□□□□ -1.47
CCDC188H7C350 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC188H7C350 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.88□□□□□ -1.47
CCDC188H7C350 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC188H7C350 IGBP1P3-201ENST00000447449 1000 ntBASIC5.88□□□□□ -1.47
CCDC188H7C350 AC005077.1-201ENST00000449226 375 ntBASIC5.88□□□□□ -1.47
CCDC188H7C350 PPIAP32-201ENST00000449940 472 ntBASIC5.88□□□□□ -1.47
CCDC188H7C350 AC073476.1-201ENST00000452854 407 ntBASIC5.88□□□□□ -1.47
CCDC188H7C350 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.88□□□□□ -1.47
CCDC188H7C350 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC188H7C350 RN7SL612P-201ENST00000497704 295 ntBASIC5.88□□□□□ -1.47
CCDC188H7C350 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC188H7C350 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC188H7C350 OR5AM1P-201ENST00000532136 1032 ntBASIC5.88□□□□□ -1.47
CCDC188H7C350 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC188H7C350 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC188H7C350 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.88□□□□□ -1.47
CCDC188H7C350 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC188H7C350 AL359219.2-201ENST00000555184 348 ntBASIC5.88□□□□□ -1.47
CCDC188H7C350 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC188H7C350 AC092332.1-201ENST00000563684 829 ntBASIC5.88□□□□□ -1.47
CCDC188H7C350 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC188H7C350 AC023389.2-201ENST00000580031 955 ntBASIC5.88□□□□□ -1.47
CCDC188H7C350 MIR4260-201ENST00000583107 67 ntBASIC5.88□□□□□ -1.47
CCDC188H7C350 AC079791.1-201ENST00000605356 973 ntBASIC5.88□□□□□ -1.47
CCDC188H7C350 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.88□□□□□ -1.47
CCDC188H7C350 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC188H7C350 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CCDC188H7C350 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC188H7C350 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC188H7C350 MAPK10-328ENST00000641553 4009 ntBASIC5.88□□□□□ -1.47
CCDC188H7C350 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CCDC188H7C350 PSG10P-201ENST00000501199 1500 ntBASIC5.88□□□□□ -1.47
CCDC188H7C350 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.88□□□□□ -1.47
CCDC188H7C350 AC018809.2-201ENST00000602436 3823 ntBASIC5.88□□□□□ -1.47
CCDC188H7C350 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CCDC188H7C350 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CCDC188H7C350 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC188H7C350 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC188H7C350 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.87□□□□□ -1.47
CCDC188H7C350 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC188H7C350 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC188H7C350 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC188H7C350 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.87□□□□□ -1.47
CCDC188H7C350 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.87□□□□□ -1.47
CCDC188H7C350 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC188H7C350 RNU4-23P-201ENST00000362839 140 ntBASIC5.87□□□□□ -1.47
CCDC188H7C350 RN7SKP186-201ENST00000365371 303 ntBASIC5.87□□□□□ -1.47
CCDC188H7C350 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC188H7C350 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CCDC188H7C350 AL358178.1-201ENST00000407698 397 ntBASIC5.87□□□□□ -1.47
CCDC188H7C350 RN7SKP29-201ENST00000410957 272 ntBASIC5.87□□□□□ -1.47
CCDC188H7C350 CDY17P-201ENST00000414121 1282 ntBASIC5.87□□□□□ -1.47
CCDC188H7C350 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC188H7C350 CDY8P-201ENST00000428380 1279 ntBASIC5.87□□□□□ -1.47
CCDC188H7C350 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC188H7C350 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC188H7C350 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC188H7C350 CDY20P-201ENST00000447528 1279 ntBASIC5.87□□□□□ -1.47
CCDC188H7C350 AZGP1P2-201ENST00000454506 345 ntBASIC5.87□□□□□ -1.47
CCDC188H7C350 CTSLP6-201ENST00000458273 1002 ntBASIC5.87□□□□□ -1.47
CCDC188H7C350 AC117394.1-201ENST00000477323 567 ntBASIC5.87□□□□□ -1.47
CCDC188H7C350 MTND3P6-201ENST00000485242 339 ntBASIC5.87□□□□□ -1.47
CCDC188H7C350 AC073610.1-201ENST00000489971 396 ntBASIC5.87□□□□□ -1.47
CCDC188H7C350 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.87□□□□□ -1.47
CCDC188H7C350 AC021106.1-201ENST00000509020 1058 ntBASIC5.87□□□□□ -1.47
CCDC188H7C350 AC091912.1-201ENST00000511351 248 ntBASIC5.87□□□□□ -1.47
CCDC188H7C350 AC098976.1-201ENST00000513014 541 ntBASIC5.87□□□□□ -1.47
CCDC188H7C350 AC138517.1-201ENST00000515724 568 ntBASIC5.87□□□□□ -1.47
CCDC188H7C350 SNORA70.11-201ENST00000515987 138 ntBASIC5.87□□□□□ -1.47
CCDC188H7C350 SNORA70.13-201ENST00000516116 138 ntBASIC5.87□□□□□ -1.47
CCDC188H7C350 AC009879.1-201ENST00000520029 839 ntBASIC5.87□□□□□ -1.47
CCDC188H7C350 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC188H7C350 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC188H7C350 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
CCDC188H7C350 NMNAT1P5-201ENST00000559657 841 ntBASIC5.87□□□□□ -1.47
CCDC188H7C350 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC188H7C350 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.87□□□□□ -1.47
CCDC188H7C350 AC009237.13-201ENST00000603193 276 ntBASIC5.87□□□□□ -1.47
CCDC188H7C350 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.87□□□□□ -1.47
CCDC188H7C350 MIR6809-201ENST00000612189 116 ntBASIC5.87□□□□□ -1.47
CCDC188H7C350 AC012676.3-201ENST00000614983 479 ntBASIC5.87□□□□□ -1.47
CCDC188H7C350 AC090607.5-201ENST00000615692 224 ntBASIC5.87□□□□□ -1.47
CCDC188H7C350 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC188H7C350 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.87□□□□□ -1.47
CCDC188H7C350 AL357140.4-201ENST00000636827 412 ntBASIC5.87□□□□□ -1.47
CCDC188H7C350 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CCDC188H7C350 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC188H7C350 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.87□□□□□ -1.47
CCDC188H7C350 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC188H7C350 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC188H7C350 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CCDC188H7C350 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms