Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 CSNK1G1-201ENST00000303052 8179 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 GPD2-202ENST00000409125 2661 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 AC011447.6-201ENST00000623510 2598 ntBASIC5.26□□□□□ -1.57
CHD8Q9HCK8 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 RPL5P5-201ENST00000392009 893 ntBASIC5.26□□□□□ -1.57
CHD8Q9HCK8 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 RPL5P9-201ENST00000448118 886 ntBASIC5.26□□□□□ -1.57
CHD8Q9HCK8 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 RPL7P16-201ENST00000479738 738 ntBASIC5.26□□□□□ -1.57
CHD8Q9HCK8 TOMM22P4-201ENST00000511318 336 ntBASIC5.26□□□□□ -1.57
CHD8Q9HCK8 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 AC005000.1-201ENST00000536192 288 ntBASIC5.26□□□□□ -1.57
CHD8Q9HCK8 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 AC130456.6-201ENST00000623745 765 ntBASIC5.26□□□□□ -1.57
CHD8Q9HCK8 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 INTS6P1-201ENST00000504674 2530 ntBASIC5.26□□□□□ -1.57
CHD8Q9HCK8 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 AC090220.1-201ENST00000593078 1699 ntBASIC5.26□□□□□ -1.57
CHD8Q9HCK8 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 AC007529.1-201ENST00000418574 2178 ntBASIC5.26□□□□□ -1.57
CHD8Q9HCK8 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CHD8Q9HCK8 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 AL078599.1-201ENST00000402075 293 ntBASIC5.25□□□□□ -1.57
CHD8Q9HCK8 RN7SKP126-201ENST00000411143 300 ntBASIC5.25□□□□□ -1.57
CHD8Q9HCK8 MGAT2P2-201ENST00000427194 797 ntBASIC5.25□□□□□ -1.57
CHD8Q9HCK8 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 AC073594.1-201ENST00000462065 364 ntBASIC5.25□□□□□ -1.57
CHD8Q9HCK8 AC073610.1-201ENST00000489971 396 ntBASIC5.25□□□□□ -1.57
CHD8Q9HCK8 FTH1P8-201ENST00000498161 514 ntBASIC5.25□□□□□ -1.57
CHD8Q9HCK8 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 AC092490.3-201ENST00000545370 572 ntBASIC5.25□□□□□ -1.57
CHD8Q9HCK8 MLECP1-201ENST00000615893 709 ntBASIC5.25□□□□□ -1.57
CHD8Q9HCK8 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 MIPEPP2-201ENST00000422560 1819 ntBASIC5.25□□□□□ -1.57
CHD8Q9HCK8 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 AL034374.2-201ENST00000605281 548 ntBASIC5.25□□□□□ -1.57
CHD8Q9HCK8 AL445423.1-201ENST00000609941 536 ntBASIC5.25□□□□□ -1.57
CHD8Q9HCK8 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 CREM-208ENST00000361599 2170 ntTSL 5 BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CHD8Q9HCK8 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.24□□□□□ -1.57
CHD8Q9HCK8 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms