Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 AC009237.12-201ENST00000604755 742 ntBASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 AP005431.1-201ENST00000618479 319 ntBASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 AC241377.1-201ENST00000619797 406 ntBASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.34□□□□□ -1.39
CCSER1Q9C0I3 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.34□□□□□ -1.4
CCSER1Q9C0I3 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.4
CCSER1Q9C0I3 LINC01963-201ENST00000562038 3148 ntBASIC6.34□□□□□ -1.4
CCSER1Q9C0I3 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 RNA5SP453-201ENST00000362503 119 ntBASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 RNA5SP394-201ENST00000364216 119 ntBASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 RNA5SP131-201ENST00000365452 119 ntBASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 RNA5SP284-201ENST00000384547 118 ntBASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 AL358876.1-201ENST00000453364 1075 ntBASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 AC087672.1-201ENST00000479876 766 ntBASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 SNORD46.2-201ENST00000516021 102 ntBASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 IGKV2-4-201ENST00000523070 340 ntBASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 PMS2P3-207ENST00000529061 717 ntBASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 AL583832.1-201ENST00000603227 784 ntBASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 AC087565.3-203ENST00000641018 837 ntBASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 AL137141.1-201ENST00000624622 4836 ntBASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 AC106872.5-201ENST00000508856 1416 ntBASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
CCSER1Q9C0I3 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 MRE11P1-201ENST00000464884 2127 ntBASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 HMGB1P20-201ENST00000402555 677 ntBASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 AC017078.1-201ENST00000416146 368 ntBASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 SETP9-201ENST00000423837 832 ntBASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 AC104843.2-201ENST00000427666 297 ntBASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 AC138761.5-201ENST00000433967 325 ntBASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 AL445665.1-202ENST00000452436 324 ntBASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 NXT1P1-201ENST00000458481 316 ntBASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 AC079600.1-201ENST00000550326 297 ntBASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 AP001153.1-201ENST00000641024 338 ntBASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 TET1P1-201ENST00000426627 2301 ntBASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCSER1Q9C0I3 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms