Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.69□□□□□ -1.34
HPS3Q969F9 RN7SL230P-201ENST00000580835 303 ntBASIC6.69□□□□□ -1.34
HPS3Q969F9 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.69□□□□□ -1.34
HPS3Q969F9 AF129408.1-201ENST00000608767 431 ntBASIC6.69□□□□□ -1.34
HPS3Q969F9 AL136097.3-201ENST00000611097 505 ntBASIC6.69□□□□□ -1.34
HPS3Q969F9 AC096861.1-201ENST00000616652 240 ntBASIC6.69□□□□□ -1.34
HPS3Q969F9 MIR6806-201ENST00000622141 64 ntBASIC6.69□□□□□ -1.34
HPS3Q969F9 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.69□□□□□ -1.34
HPS3Q969F9 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.69□□□□□ -1.34
HPS3Q969F9 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.69□□□□□ -1.34
HPS3Q969F9 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
HPS3Q969F9 AL359955.1-201ENST00000455242 3275 ntBASIC6.69□□□□□ -1.34
HPS3Q969F9 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HPS3Q969F9 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.69□□□□□ -1.34
HPS3Q969F9 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.69□□□□□ -1.34
HPS3Q969F9 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.69□□□□□ -1.34
HPS3Q969F9 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HPS3Q969F9 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
HPS3Q969F9 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
HPS3Q969F9 RBMY1HP-201ENST00000382759 1389 ntBASIC6.69□□□□□ -1.34
HPS3Q969F9 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
HPS3Q969F9 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
HPS3Q969F9 AC027279.4-201ENST00000624371 2072 ntBASIC6.69□□□□□ -1.34
HPS3Q969F9 AC012078.1-201ENST00000405035 1646 ntBASIC6.68□□□□□ -1.34
HPS3Q969F9 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.68□□□□□ -1.34
HPS3Q969F9 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.68□□□□□ -1.34
HPS3Q969F9 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
HPS3Q969F9 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.68□□□□□ -1.34
HPS3Q969F9 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HPS3Q969F9 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
HPS3Q969F9 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HPS3Q969F9 MTCO1P28-201ENST00000574177 1528 ntBASIC6.68□□□□□ -1.34
HPS3Q969F9 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
HPS3Q969F9 MIR130B-202ENST00000385018 82 ntBASIC6.68□□□□□ -1.34
HPS3Q969F9 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.68□□□□□ -1.34
HPS3Q969F9 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.68□□□□□ -1.34
HPS3Q969F9 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC6.68□□□□□ -1.34
HPS3Q969F9 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.68□□□□□ -1.34
HPS3Q969F9 MTCO2P1-201ENST00000424648 477 ntBASIC6.68□□□□□ -1.34
HPS3Q969F9 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.68□□□□□ -1.34
HPS3Q969F9 IGLV3-4-201ENST00000432300 244 ntBASIC6.68□□□□□ -1.34
HPS3Q969F9 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.68□□□□□ -1.34
HPS3Q969F9 RPL5P10-201ENST00000445207 894 ntBASIC6.68□□□□□ -1.34
HPS3Q969F9 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.68□□□□□ -1.34
HPS3Q969F9 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC6.68□□□□□ -1.34
HPS3Q969F9 ACA64.4-201ENST00000459070 127 ntBASIC6.68□□□□□ -1.34
HPS3Q969F9 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.68□□□□□ -1.34
HPS3Q969F9 AC112198.4-201ENST00000515450 351 ntBASIC6.68□□□□□ -1.34
HPS3Q969F9 RNU6-415P-201ENST00000516252 97 ntBASIC6.68□□□□□ -1.34
HPS3Q969F9 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.68□□□□□ -1.34
HPS3Q969F9 IGKV3D-25-201ENST00000519599 235 ntBASIC6.68□□□□□ -1.34
HPS3Q969F9 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HPS3Q969F9 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.68□□□□□ -1.34
HPS3Q969F9 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.68□□□□□ -1.34
HPS3Q969F9 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.68□□□□□ -1.34
HPS3Q969F9 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.68□□□□□ -1.34
HPS3Q969F9 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.68□□□□□ -1.34
HPS3Q969F9 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.68□□□□□ -1.34
HPS3Q969F9 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.68□□□□□ -1.34
HPS3Q969F9 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.68□□□□□ -1.34
HPS3Q969F9 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
HPS3Q969F9 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC6.68□□□□□ -1.34
HPS3Q969F9 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.68□□□□□ -1.34
HPS3Q969F9 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.68□□□□□ -1.34
HPS3Q969F9 AC119403.2-201ENST00000590960 598 ntBASIC6.68□□□□□ -1.34
HPS3Q969F9 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.68□□□□□ -1.34
HPS3Q969F9 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HPS3Q969F9 MTCO3P22-201ENST00000603219 784 ntBASIC6.68□□□□□ -1.34
HPS3Q969F9 AL645933.2-201ENST00000606743 1207 ntBASIC6.68□□□□□ -1.34
HPS3Q969F9 AC005021.1-201ENST00000608730 355 ntBASIC6.68□□□□□ -1.34
HPS3Q969F9 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HPS3Q969F9 MIR6778-201ENST00000617912 73 ntBASIC6.68□□□□□ -1.34
HPS3Q969F9 AL683826.1-201ENST00000624104 627 ntBASIC6.68□□□□□ -1.34
HPS3Q969F9 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.68□□□□□ -1.34
HPS3Q969F9 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HPS3Q969F9 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
HPS3Q969F9 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
HPS3Q969F9 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HPS3Q969F9 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HPS3Q969F9 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.68□□□□□ -1.34
HPS3Q969F9 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
HPS3Q969F9 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
HPS3Q969F9 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HPS3Q969F9 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
HPS3Q969F9 CASC19-261ENST00000641853 1638 ntBASIC6.68□□□□□ -1.34
HPS3Q969F9 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
HPS3Q969F9 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.68□□□□□ -1.34
HPS3Q969F9 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
HPS3Q969F9 MTCO1P4-201ENST00000520516 1409 ntBASIC6.67□□□□□ -1.34
HPS3Q969F9 AC092111.2-201ENST00000611627 1414 ntBASIC6.67□□□□□ -1.34
HPS3Q969F9 AC008627.1-201ENST00000517511 1704 ntBASIC6.67□□□□□ -1.34
HPS3Q969F9 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HPS3Q969F9 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
HPS3Q969F9 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.67□□□□□ -1.34
HPS3Q969F9 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.67□□□□□ -1.34
HPS3Q969F9 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
HPS3Q969F9 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HPS3Q969F9 OR4K17-201ENST00000315543 1032 ntBASIC6.67□□□□□ -1.34
HPS3Q969F9 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
HPS3Q969F9 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms