Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 AL603750.1-201ENST00000624216 1717 ntBASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 OR4G2P-201ENST00000328113 903 ntBASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 Y_RNA.70-201ENST00000362886 110 ntBASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 RN7SKP171-201ENST00000364417 303 ntBASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 PGBD4P8-201ENST00000412993 562 ntBASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 AC245052.5-201ENST00000416320 649 ntBASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 USP9YP20-201ENST00000419224 558 ntBASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 AC004074.1-201ENST00000421810 1063 ntBASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 RPL23AP85-201ENST00000421838 433 ntBASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 MTCO2P11-201ENST00000431069 680 ntBASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 USP9YP29-201ENST00000445112 563 ntBASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 OR4G11P-201ENST00000492842 939 ntBASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 AC079382.1-201ENST00000493346 557 ntBASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 RNA5SP318-201ENST00000516352 92 ntBASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 HIGD1AP10-201ENST00000527837 282 ntBASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 AP001317.1-201ENST00000531194 960 ntBASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 AC087897.1-201ENST00000550134 156 ntBASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 AC107958.1-201ENST00000556576 290 ntBASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 RPL29P33-201ENST00000587474 316 ntBASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 AC090181.2-201ENST00000602975 672 ntBASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 AC007255.2-201ENST00000604053 631 ntBASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 AL008582.1-201ENST00000609612 442 ntBASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 AC068726.1-201ENST00000610993 341 ntBASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 AC012150.2-201ENST00000621300 544 ntBASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 AC068213.1-201ENST00000625124 226 ntBASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 AC116618.1-201ENST00000634617 774 ntBASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 EIF3EP1-201ENST00000433978 1316 ntBASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
SHKBP1Q8TBC3 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC7.18□□□□□ -1.26
SHKBP1Q8TBC3 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SHKBP1Q8TBC3 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SHKBP1Q8TBC3 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.18□□□□□ -1.26
SHKBP1Q8TBC3 AC217777.1-201ENST00000570034 1471 ntBASIC7.18□□□□□ -1.26
SHKBP1Q8TBC3 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SHKBP1Q8TBC3 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SHKBP1Q8TBC3 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
SHKBP1Q8TBC3 AC007993.1-201ENST00000621298 2430 ntBASIC7.18□□□□□ -1.26
SHKBP1Q8TBC3 ATP8A2P3-201ENST00000426792 1536 ntBASIC7.18□□□□□ -1.26
SHKBP1Q8TBC3 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SHKBP1Q8TBC3 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SHKBP1Q8TBC3 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SHKBP1Q8TBC3 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SHKBP1Q8TBC3 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
SHKBP1Q8TBC3 RN7SKP250-201ENST00000363924 321 ntBASIC7.18□□□□□ -1.26
SHKBP1Q8TBC3 SNORA64.3-201ENST00000365647 134 ntBASIC7.18□□□□□ -1.26
SHKBP1Q8TBC3 ARL4AP5-201ENST00000404372 599 ntBASIC7.18□□□□□ -1.26
SHKBP1Q8TBC3 AL590635.1-201ENST00000406314 586 ntBASIC7.18□□□□□ -1.26
SHKBP1Q8TBC3 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.18□□□□□ -1.26
SHKBP1Q8TBC3 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC7.18□□□□□ -1.26
SHKBP1Q8TBC3 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.18□□□□□ -1.26
SHKBP1Q8TBC3 MTND1P32-201ENST00000433043 938 ntBASIC7.18□□□□□ -1.26
SHKBP1Q8TBC3 AC245452.2-201ENST00000435222 392 ntBASIC7.18□□□□□ -1.26
SHKBP1Q8TBC3 LINC00328-2P-201ENST00000436585 219 ntBASIC7.18□□□□□ -1.26
SHKBP1Q8TBC3 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC7.18□□□□□ -1.26
SHKBP1Q8TBC3 AC000041.1-201ENST00000439655 175 ntBASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms