Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.36□□□□□ -1.55
H3F3CQ6NXT2 AC090602.1-201ENST00000469695 252 ntBASIC5.36□□□□□ -1.55
H3F3CQ6NXT2 AL355032.1-201ENST00000472981 438 ntBASIC5.36□□□□□ -1.55
H3F3CQ6NXT2 AC009120.1-201ENST00000493458 473 ntBASIC5.36□□□□□ -1.55
H3F3CQ6NXT2 SCARNA6.1-201ENST00000516989 238 ntBASIC5.36□□□□□ -1.55
H3F3CQ6NXT2 SNORA43.3-201ENST00000517240 103 ntBASIC5.36□□□□□ -1.55
H3F3CQ6NXT2 AC021678.3-201ENST00000517893 476 ntBASIC5.36□□□□□ -1.55
H3F3CQ6NXT2 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.36□□□□□ -1.55
H3F3CQ6NXT2 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.36□□□□□ -1.55
H3F3CQ6NXT2 HMGB1P42-201ENST00000532126 553 ntBASIC5.36□□□□□ -1.55
H3F3CQ6NXT2 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.36□□□□□ -1.55
H3F3CQ6NXT2 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.36□□□□□ -1.55
H3F3CQ6NXT2 MIR3176-201ENST00000582210 90 ntBASIC5.36□□□□□ -1.55
H3F3CQ6NXT2 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.36□□□□□ -1.55
H3F3CQ6NXT2 FO393422.1-201ENST00000603908 708 ntBASIC5.36□□□□□ -1.55
H3F3CQ6NXT2 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.36□□□□□ -1.55
H3F3CQ6NXT2 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.36□□□□□ -1.55
H3F3CQ6NXT2 RNA5SP439-201ENST00000617595 124 ntBASIC5.36□□□□□ -1.55
H3F3CQ6NXT2 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.36□□□□□ -1.55
H3F3CQ6NXT2 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.36□□□□□ -1.55
H3F3CQ6NXT2 CU639417.4-201ENST00000623928 207 ntBASIC5.36□□□□□ -1.55
H3F3CQ6NXT2 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.36□□□□□ -1.55
H3F3CQ6NXT2 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
H3F3CQ6NXT2 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.36□□□□□ -1.55
H3F3CQ6NXT2 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
H3F3CQ6NXT2 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 MTCO1P11-201ENST00000429111 1528 ntBASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 AL391422.1-201ENST00000402155 436 ntBASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 RN7SKP229-201ENST00000410465 302 ntBASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 RN7SKP17-201ENST00000411242 351 ntBASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 OR2AT2P-201ENST00000413438 905 ntBASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 AL596448.1-201ENST00000415024 392 ntBASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 AC005297.1-201ENST00000444765 862 ntBASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 AC073909.1-201ENST00000447112 999 ntBASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 RPS3AP15-201ENST00000483874 781 ntBASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 RN7SL570P-201ENST00000484405 292 ntBASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 AC074255.1-201ENST00000511259 501 ntBASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 AC126615.2-201ENST00000553003 515 ntBASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 AC007346.2-201ENST00000564816 892 ntBASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 AC007066.2-202ENST00000566531 914 ntBASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 AC063977.5-201ENST00000601044 974 ntBASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 AL589674.2-201ENST00000604304 337 ntBASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 AC104695.2-201ENST00000605056 775 ntBASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 RNU6-84P-201ENST00000607737 102 ntBASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 AC004477.3-201ENST00000614061 590 ntBASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 AL691477.1-201ENST00000624398 162 ntBASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 AL049767.1-202ENST00000637826 242 ntBASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 GTF2IP4-201ENST00000453092 2054 ntBASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
H3F3CQ6NXT2 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
H3F3CQ6NXT2 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.34□□□□□ -1.55
H3F3CQ6NXT2 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
H3F3CQ6NXT2 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
H3F3CQ6NXT2 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
H3F3CQ6NXT2 AL359955.1-201ENST00000455242 3275 ntBASIC5.34□□□□□ -1.55
H3F3CQ6NXT2 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.34□□□□□ -1.55
H3F3CQ6NXT2 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
H3F3CQ6NXT2 LINC01963-201ENST00000562038 3148 ntBASIC5.34□□□□□ -1.55
H3F3CQ6NXT2 CIR1P2-201ENST00000514821 1342 ntBASIC5.34□□□□□ -1.55
H3F3CQ6NXT2 AL159987.1-201ENST00000347911 293 ntBASIC5.34□□□□□ -1.55
H3F3CQ6NXT2 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
H3F3CQ6NXT2 U3.25-201ENST00000391209 220 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms