Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.42□□□□□ -1.54
HMGCS1Q01581 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMGCS1Q01581 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
HMGCS1Q01581 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HMGCS1Q01581 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
HMGCS1Q01581 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HMGCS1Q01581 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.41□□□□□ -1.54
HMGCS1Q01581 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HMGCS1Q01581 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HMGCS1Q01581 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HMGCS1Q01581 AC005261.2-201ENST00000593427 4258 ntBASIC5.41□□□□□ -1.54
HMGCS1Q01581 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HMGCS1Q01581 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HMGCS1Q01581 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HMGCS1Q01581 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.41□□□□□ -1.54
HMGCS1Q01581 AC120036.2-201ENST00000509729 1474 ntBASIC5.41□□□□□ -1.54
HMGCS1Q01581 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
HMGCS1Q01581 OR7E25P-201ENST00000344844 931 ntBASIC5.41□□□□□ -1.54
HMGCS1Q01581 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HMGCS1Q01581 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HMGCS1Q01581 U3.28-201ENST00000391249 210 ntBASIC5.41□□□□□ -1.54
HMGCS1Q01581 MIR1282-201ENST00000408865 101 ntBASIC5.41□□□□□ -1.54
HMGCS1Q01581 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.41□□□□□ -1.54
HMGCS1Q01581 AK4P4-201ENST00000419465 646 ntBASIC5.41□□□□□ -1.54
HMGCS1Q01581 NENFP1-201ENST00000419476 466 ntBASIC5.41□□□□□ -1.54
HMGCS1Q01581 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.41□□□□□ -1.54
HMGCS1Q01581 NANOGP9-201ENST00000439890 892 ntBASIC5.41□□□□□ -1.54
HMGCS1Q01581 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.41□□□□□ -1.54
HMGCS1Q01581 LINC02210-201ENST00000444561 288 ntBASIC5.41□□□□□ -1.54
HMGCS1Q01581 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC5.41□□□□□ -1.54
HMGCS1Q01581 HLA-DPA3-207ENST00000454398 229 ntBASIC5.41□□□□□ -1.54
HMGCS1Q01581 NXT1P1-201ENST00000458481 316 ntBASIC5.41□□□□□ -1.54
HMGCS1Q01581 AC094085.1-201ENST00000468914 584 ntBASIC5.41□□□□□ -1.54
HMGCS1Q01581 RPS17P15-201ENST00000475609 349 ntBASIC5.41□□□□□ -1.54
HMGCS1Q01581 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HMGCS1Q01581 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.41□□□□□ -1.54
HMGCS1Q01581 NANOGNBP2-201ENST00000544753 553 ntBASIC5.41□□□□□ -1.54
HMGCS1Q01581 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.41□□□□□ -1.54
HMGCS1Q01581 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.41□□□□□ -1.54
HMGCS1Q01581 NPM1P5-201ENST00000557228 838 ntBASIC5.41□□□□□ -1.54
HMGCS1Q01581 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.41□□□□□ -1.54
HMGCS1Q01581 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.41□□□□□ -1.54
HMGCS1Q01581 AL365181.4-201ENST00000609800 547 ntBASIC5.41□□□□□ -1.54
HMGCS1Q01581 AC007786.3-201ENST00000615154 596 ntBASIC5.41□□□□□ -1.54
HMGCS1Q01581 AC129915.3-201ENST00000634128 948 ntBASIC5.41□□□□□ -1.54
HMGCS1Q01581 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HMGCS1Q01581 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HMGCS1Q01581 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.41□□□□□ -1.54
HMGCS1Q01581 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HMGCS1Q01581 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
HMGCS1Q01581 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
HMGCS1Q01581 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HMGCS1Q01581 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
HMGCS1Q01581 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HMGCS1Q01581 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.4□□□□□ -1.54
HMGCS1Q01581 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HMGCS1Q01581 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HMGCS1Q01581 AL360270.2-201ENST00000562952 5985 ntBASIC5.4□□□□□ -1.54
HMGCS1Q01581 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HMGCS1Q01581 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
HMGCS1Q01581 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HMGCS1Q01581 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
HMGCS1Q01581 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
HMGCS1Q01581 AL034546.1-201ENST00000623740 3693 ntBASIC5.4□□□□□ -1.54
HMGCS1Q01581 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HMGCS1Q01581 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HMGCS1Q01581 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.4□□□□□ -1.54
HMGCS1Q01581 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.4□□□□□ -1.54
HMGCS1Q01581 GAPDHP24-201ENST00000328713 983 ntBASIC5.4□□□□□ -1.54
HMGCS1Q01581 RNA5SP30-201ENST00000365552 115 ntBASIC5.4□□□□□ -1.54
HMGCS1Q01581 AL133482.1-201ENST00000415988 498 ntBASIC5.4□□□□□ -1.54
HMGCS1Q01581 CDY8P-201ENST00000428380 1279 ntBASIC5.4□□□□□ -1.54
HMGCS1Q01581 KCTD9P1-201ENST00000430462 1167 ntBASIC5.4□□□□□ -1.54
HMGCS1Q01581 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.4□□□□□ -1.54
HMGCS1Q01581 CDY20P-201ENST00000447528 1279 ntBASIC5.4□□□□□ -1.54
HMGCS1Q01581 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.4□□□□□ -1.54
HMGCS1Q01581 AC006499.4-201ENST00000510947 694 ntBASIC5.4□□□□□ -1.54
HMGCS1Q01581 RNA5SP271-201ENST00000516700 88 ntBASIC5.4□□□□□ -1.54
HMGCS1Q01581 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.4□□□□□ -1.54
HMGCS1Q01581 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.4□□□□□ -1.54
HMGCS1Q01581 MIR4433B-201ENST00000581329 102 ntBASIC5.4□□□□□ -1.54
HMGCS1Q01581 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.4□□□□□ -1.54
HMGCS1Q01581 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HMGCS1Q01581 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HMGCS1Q01581 AC063977.5-201ENST00000601044 974 ntBASIC5.4□□□□□ -1.54
HMGCS1Q01581 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HMGCS1Q01581 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.4□□□□□ -1.54
HMGCS1Q01581 OR8G3P-202ENST00000641572 1255 ntBASIC5.4□□□□□ -1.54
HMGCS1Q01581 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HMGCS1Q01581 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
HMGCS1Q01581 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.4□□□□□ -1.55
HMGCS1Q01581 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.4□□□□□ -1.55
HMGCS1Q01581 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
HMGCS1Q01581 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HMGCS1Q01581 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.55
HMGCS1Q01581 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.4□□□□□ -1.55
HMGCS1Q01581 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMGCS1Q01581 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.39□□□□□ -1.55
HMGCS1Q01581 MRE11P1-201ENST00000464884 2127 ntBASIC5.39□□□□□ -1.55
HMGCS1Q01581 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms