Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.19□□□□□ -1.42
HDAC4P56524 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.19□□□□□ -1.42
HDAC4P56524 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.19□□□□□ -1.42
HDAC4P56524 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.19□□□□□ -1.42
HDAC4P56524 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HDAC4P56524 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.19□□□□□ -1.42
HDAC4P56524 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.19□□□□□ -1.42
HDAC4P56524 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.19□□□□□ -1.42
HDAC4P56524 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.19□□□□□ -1.42
HDAC4P56524 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC6.19□□□□□ -1.42
HDAC4P56524 AC005244.1-201ENST00000582566 339 ntBASIC6.19□□□□□ -1.42
HDAC4P56524 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.19□□□□□ -1.42
HDAC4P56524 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.19□□□□□ -1.42
HDAC4P56524 AP001267.4-201ENST00000602598 545 ntBASIC6.19□□□□□ -1.42
HDAC4P56524 AC093388.1-201ENST00000609166 430 ntBASIC6.19□□□□□ -1.42
HDAC4P56524 AC108673.3-201ENST00000609183 335 ntBASIC6.19□□□□□ -1.42
HDAC4P56524 AL133445.2-201ENST00000611191 527 ntBASIC6.19□□□□□ -1.42
HDAC4P56524 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.19□□□□□ -1.42
HDAC4P56524 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.19□□□□□ -1.42
HDAC4P56524 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.19□□□□□ -1.42
HDAC4P56524 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.19□□□□□ -1.42
HDAC4P56524 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
HDAC4P56524 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HDAC4P56524 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
HDAC4P56524 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.19□□□□□ -1.42
HDAC4P56524 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
HDAC4P56524 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
HDAC4P56524 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
HDAC4P56524 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HDAC4P56524 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HDAC4P56524 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HDAC4P56524 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HDAC4P56524 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HDAC4P56524 AC093849.1-201ENST00000563631 2209 ntBASIC6.18□□□□□ -1.42
HDAC4P56524 AC025470.1-201ENST00000510053 2032 ntBASIC6.18□□□□□ -1.42
HDAC4P56524 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
HDAC4P56524 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
HDAC4P56524 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HDAC4P56524 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HDAC4P56524 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HDAC4P56524 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.18□□□□□ -1.42
HDAC4P56524 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HDAC4P56524 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
HDAC4P56524 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HDAC4P56524 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HDAC4P56524 RNU6-819P-201ENST00000364116 107 ntBASIC6.18□□□□□ -1.42
HDAC4P56524 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HDAC4P56524 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HDAC4P56524 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
HDAC4P56524 MAPRE1P3-201ENST00000435438 796 ntBASIC6.18□□□□□ -1.42
HDAC4P56524 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.18□□□□□ -1.42
HDAC4P56524 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.18□□□□□ -1.42
HDAC4P56524 CFL1P4-201ENST00000451536 498 ntBASIC6.18□□□□□ -1.42
HDAC4P56524 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.18□□□□□ -1.42
HDAC4P56524 AL603882.1-201ENST00000463059 681 ntBASIC6.18□□□□□ -1.42
HDAC4P56524 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.18□□□□□ -1.42
HDAC4P56524 AP002884.1-201ENST00000479691 655 ntBASIC6.18□□□□□ -1.42
HDAC4P56524 RWDD4P1-201ENST00000488019 565 ntBASIC6.18□□□□□ -1.42
HDAC4P56524 NPM1P28-201ENST00000492269 840 ntBASIC6.18□□□□□ -1.42
HDAC4P56524 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.18□□□□□ -1.42
HDAC4P56524 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.18□□□□□ -1.42
HDAC4P56524 AC105420.1-201ENST00000504389 582 ntBASIC6.18□□□□□ -1.42
HDAC4P56524 SNORA70.17-201ENST00000516449 133 ntBASIC6.18□□□□□ -1.42
HDAC4P56524 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.18□□□□□ -1.42
HDAC4P56524 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.18□□□□□ -1.42
HDAC4P56524 AC009268.1-201ENST00000561352 1203 ntBASIC6.18□□□□□ -1.42
HDAC4P56524 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.18□□□□□ -1.42
HDAC4P56524 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.18□□□□□ -1.42
HDAC4P56524 AC015982.1-201ENST00000608113 465 ntBASIC6.18□□□□□ -1.42
HDAC4P56524 MIR6862-1-201ENST00000613016 70 ntBASIC6.18□□□□□ -1.42
HDAC4P56524 MIR6862-2-201ENST00000614755 70 ntBASIC6.18□□□□□ -1.42
HDAC4P56524 AC020763.5-201ENST00000623298 430 ntBASIC6.18□□□□□ -1.42
HDAC4P56524 SNX18P12-201ENST00000624821 759 ntBASIC6.18□□□□□ -1.42
HDAC4P56524 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.18□□□□□ -1.42
HDAC4P56524 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.18□□□□□ -1.42
HDAC4P56524 AL139254.3-201ENST00000641097 674 ntBASIC6.18□□□□□ -1.42
HDAC4P56524 AC020656.2-201ENST00000613291 5309 ntBASIC6.18□□□□□ -1.42
HDAC4P56524 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HDAC4P56524 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HDAC4P56524 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HDAC4P56524 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HDAC4P56524 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
HDAC4P56524 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
HDAC4P56524 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
HDAC4P56524 IFIT1P1-201ENST00000400497 1449 ntBASIC6.17□□□□□ -1.42
HDAC4P56524 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
HDAC4P56524 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.17□□□□□ -1.42
HDAC4P56524 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HDAC4P56524 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HDAC4P56524 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
HDAC4P56524 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
HDAC4P56524 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.17□□□□□ -1.42
HDAC4P56524 AC098592.2-201ENST00000413158 265 ntBASIC6.17□□□□□ -1.42
HDAC4P56524 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.17□□□□□ -1.42
HDAC4P56524 RPS4XP5-201ENST00000419038 768 ntBASIC6.17□□□□□ -1.42
HDAC4P56524 AC009506.2-201ENST00000420635 840 ntBASIC6.17□□□□□ -1.42
HDAC4P56524 RPL5P2-201ENST00000429598 854 ntBASIC6.17□□□□□ -1.42
HDAC4P56524 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.17□□□□□ -1.42
HDAC4P56524 Z85994.2-201ENST00000434327 452 ntBASIC6.17□□□□□ -1.42
HDAC4P56524 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms