Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
NUP98P52948 AC002456.2-201ENST00000509356 380 ntBASIC6.81□□□□□ -1.32
NUP98P52948 MTND6P2-201ENST00000512226 524 ntBASIC6.81□□□□□ -1.32
NUP98P52948 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.81□□□□□ -1.32
NUP98P52948 MIR4646-201ENST00000580775 63 ntBASIC6.81□□□□□ -1.32
NUP98P52948 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
NUP98P52948 AC133644.2-201ENST00000608142 540 ntBASIC6.81□□□□□ -1.32
NUP98P52948 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NUP98P52948 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
NUP98P52948 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.81□□□□□ -1.32
NUP98P52948 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.81□□□□□ -1.32
NUP98P52948 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NUP98P52948 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.81□□□□□ -1.32
NUP98P52948 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NUP98P52948 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.81□□□□□ -1.32
NUP98P52948 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NUP98P52948 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
NUP98P52948 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
NUP98P52948 RN7SKP216-201ENST00000411050 312 ntBASIC6.8□□□□□ -1.32
NUP98P52948 RPS26P13-201ENST00000419030 330 ntBASIC6.8□□□□□ -1.32
NUP98P52948 GSTM5P1-201ENST00000434751 660 ntBASIC6.8□□□□□ -1.32
NUP98P52948 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.8□□□□□ -1.32
NUP98P52948 AC058823.1-201ENST00000485315 474 ntBASIC6.8□□□□□ -1.32
NUP98P52948 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
NUP98P52948 AC091953.3-201ENST00000623220 236 ntBASIC6.8□□□□□ -1.32
NUP98P52948 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.8□□□□□ -1.32
NUP98P52948 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.8□□□□□ -1.32
NUP98P52948 AL078621.3-201ENST00000623707 2042 ntBASIC6.8□□□□□ -1.32
NUP98P52948 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.8□□□□□ -1.32
NUP98P52948 AC023421.1-201ENST00000590535 1785 ntBASIC6.8□□□□□ -1.32
NUP98P52948 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
NUP98P52948 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.8□□□□□ -1.32
NUP98P52948 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NUP98P52948 RN7SKP115-201ENST00000363177 317 ntBASIC6.8□□□□□ -1.32
NUP98P52948 MIR765-201ENST00000390226 114 ntBASIC6.8□□□□□ -1.32
NUP98P52948 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
NUP98P52948 RN7SKP213-201ENST00000410746 298 ntBASIC6.8□□□□□ -1.32
NUP98P52948 AC009784.1-201ENST00000426484 460 ntBASIC6.8□□□□□ -1.32
NUP98P52948 RPS23P9-201ENST00000448848 438 ntBASIC6.8□□□□□ -1.32
NUP98P52948 ATP5LP5-201ENST00000483050 299 ntBASIC6.8□□□□□ -1.32
NUP98P52948 GTF2F2P1-201ENST00000511083 675 ntBASIC6.8□□□□□ -1.32
NUP98P52948 snoU109.5-201ENST00000516231 132 ntBASIC6.8□□□□□ -1.32
NUP98P52948 SCARNA16.4-201ENST00000516956 187 ntBASIC6.8□□□□□ -1.32
NUP98P52948 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.8□□□□□ -1.32
NUP98P52948 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.8□□□□□ -1.32
NUP98P52948 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.8□□□□□ -1.32
NUP98P52948 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.8□□□□□ -1.32
NUP98P52948 H3F3BP2-201ENST00000583907 357 ntBASIC6.8□□□□□ -1.32
NUP98P52948 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.8□□□□□ -1.32
NUP98P52948 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.8□□□□□ -1.32
NUP98P52948 AC079753.1-201ENST00000623243 3868 ntBASIC6.8□□□□□ -1.32
NUP98P52948 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.8□□□□□ -1.32
NUP98P52948 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NUP98P52948 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
NUP98P52948 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
NUP98P52948 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.79□□□□□ -1.32
NUP98P52948 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NUP98P52948 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
NUP98P52948 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.79□□□□□ -1.32
NUP98P52948 AC092747.4-201ENST00000620519 1861 ntBASIC6.79□□□□□ -1.32
NUP98P52948 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.79□□□□□ -1.32
NUP98P52948 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NUP98P52948 RN7SKP126-201ENST00000411143 300 ntBASIC6.79□□□□□ -1.32
NUP98P52948 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC6.79□□□□□ -1.32
NUP98P52948 RHOT1P3-201ENST00000436571 331 ntBASIC6.79□□□□□ -1.32
NUP98P52948 AP004607.2-201ENST00000533949 322 ntBASIC6.79□□□□□ -1.32
NUP98P52948 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.79□□□□□ -1.32
NUP98P52948 AC060766.1-201ENST00000590824 627 ntBASIC6.79□□□□□ -1.32
NUP98P52948 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC6.79□□□□□ -1.32
NUP98P52948 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.79□□□□□ -1.32
NUP98P52948 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NUP98P52948 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NUP98P52948 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NUP98P52948 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
NUP98P52948 AC006600.2-201ENST00000624834 2506 ntBASIC6.79□□□□□ -1.32
NUP98P52948 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NUP98P52948 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.79□□□□□ -1.32
NUP98P52948 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
NUP98P52948 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.79□□□□□ -1.32
NUP98P52948 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NUP98P52948 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NUP98P52948 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NUP98P52948 AL133270.1-201ENST00000402635 279 ntBASIC6.78□□□□□ -1.32
NUP98P52948 CRIP1P1-201ENST00000427567 185 ntBASIC6.78□□□□□ -1.32
NUP98P52948 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.78□□□□□ -1.32
NUP98P52948 AL645937.3-201ENST00000453647 936 ntBASIC6.78□□□□□ -1.32
NUP98P52948 AC092754.1-201ENST00000472975 479 ntBASIC6.78□□□□□ -1.32
NUP98P52948 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.78□□□□□ -1.32
NUP98P52948 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.78□□□□□ -1.32
NUP98P52948 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.78□□□□□ -1.32
NUP98P52948 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.78□□□□□ -1.32
NUP98P52948 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NUP98P52948 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.78□□□□□ -1.32
NUP98P52948 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.78□□□□□ -1.32
NUP98P52948 MAPK10-304ENST00000641341 3984 ntBASIC6.78□□□□□ -1.32
NUP98P52948 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.78□□□□□ -1.32
NUP98P52948 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.78□□□□□ -1.32
NUP98P52948 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
NUP98P52948 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
NUP98P52948 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms