Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 FLNB-202ENST00000358537 9391 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.48
BRCA2P51587 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
BRCA2P51587 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
BRCA2P51587 COL4A6-203ENST00000394872 6750 ntTSL 5 BASIC5.84□□□□□ -1.48
BRCA2P51587 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
BRCA2P51587 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
BRCA2P51587 RPEP3-201ENST00000425462 676 ntBASIC5.83□□□□□ -1.48
BRCA2P51587 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.83□□□□□ -1.48
BRCA2P51587 TXNP5-201ENST00000441043 315 ntBASIC5.83□□□□□ -1.48
BRCA2P51587 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.83□□□□□ -1.48
BRCA2P51587 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.83□□□□□ -1.48
BRCA2P51587 AC079414.3-201ENST00000612986 1090 ntBASIC5.83□□□□□ -1.48
BRCA2P51587 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
BRCA2P51587 MYH1-201ENST00000226207 6024 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
BRCA2P51587 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
BRCA2P51587 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.83□□□□□ -1.48
BRCA2P51587 LINC01963-201ENST00000562038 3148 ntBASIC5.83□□□□□ -1.48
BRCA2P51587 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
BRCA2P51587 PTPRB-204ENST00000538708 5839 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
BRCA2P51587 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
BRCA2P51587 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
BRCA2P51587 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
BRCA2P51587 TMEM183AP1-205ENST00000432739 290 ntBASIC5.83□□□□□ -1.48
BRCA2P51587 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
BRCA2P51587 CR383656.1-201ENST00000484916 377 ntBASIC5.83□□□□□ -1.48
BRCA2P51587 RPS7P6-201ENST00000485777 579 ntBASIC5.83□□□□□ -1.48
BRCA2P51587 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.83□□□□□ -1.48
BRCA2P51587 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC5.83□□□□□ -1.48
BRCA2P51587 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
BRCA2P51587 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.83□□□□□ -1.48
BRCA2P51587 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
BRCA2P51587 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
BRCA2P51587 HERC2P3-204ENST00000426501 5995 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
BRCA2P51587 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
BRCA2P51587 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
BRCA2P51587 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
BRCA2P51587 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.83□□□□□ -1.48
BRCA2P51587 AL158073.1-201ENST00000426848 1104 ntBASIC5.83□□□□□ -1.48
BRCA2P51587 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
BRCA2P51587 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.83□□□□□ -1.48
BRCA2P51587 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.83□□□□□ -1.48
BRCA2P51587 OR5AM1P-201ENST00000532136 1032 ntBASIC5.83□□□□□ -1.48
BRCA2P51587 FLNB-204ENST00000429972 9430 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
BRCA2P51587 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
BRCA2P51587 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
BRCA2P51587 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
BRCA2P51587 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.82□□□□□ -1.48
BRCA2P51587 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.82□□□□□ -1.48
BRCA2P51587 AFF2-205ENST00000370460 13746 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
BRCA2P51587 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
BRCA2P51587 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
BRCA2P51587 OR52B5P-204ENST00000641744 3467 ntBASIC5.82□□□□□ -1.48
BRCA2P51587 SLC33A1-202ENST00000392845 9217 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
BRCA2P51587 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.82□□□□□ -1.48
BRCA2P51587 AP000797.2-201ENST00000475768 606 ntBASIC5.82□□□□□ -1.48
BRCA2P51587 NCOA4P3-201ENST00000513203 1877 ntBASIC5.82□□□□□ -1.48
BRCA2P51587 AC133555.2-201ENST00000550213 292 ntBASIC5.82□□□□□ -1.48
BRCA2P51587 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
BRCA2P51587 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC5.82□□□□□ -1.48
BRCA2P51587 OR5M2P-202ENST00000641241 4242 ntBASIC5.82□□□□□ -1.48
BRCA2P51587 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
BRCA2P51587 OR1D2-203ENST00000641833 4887 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
BRCA2P51587 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.82□□□□□ -1.48
BRCA2P51587 ZNF608-201ENST00000306315 5958 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
BRCA2P51587 EYA4-203ENST00000367895 5699 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
BRCA2P51587 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.82□□□□□ -1.48
BRCA2P51587 TP53BP1-210ENST00000450115 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
BRCA2P51587 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
BRCA2P51587 AC133552.1-201ENST00000569988 4007 ntBASIC5.82□□□□□ -1.48
BRCA2P51587 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
BRCA2P51587 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
BRCA2P51587 FAM32BP-201ENST00000344033 333 ntBASIC5.82□□□□□ -1.48
BRCA2P51587 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.82□□□□□ -1.48
BRCA2P51587 CENPIP1-201ENST00000425713 902 ntBASIC5.82□□□□□ -1.48
BRCA2P51587 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.82□□□□□ -1.48
BRCA2P51587 LRRC37BP1-203ENST00000417404 4742 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
BRCA2P51587 TTLL4-201ENST00000258398 4730 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
BRCA2P51587 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
BRCA2P51587 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
BRCA2P51587 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC5.82□□□□□ -1.48
BRCA2P51587 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
BRCA2P51587 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
BRCA2P51587 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
BRCA2P51587 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC5.81□□□□□ -1.48
BRCA2P51587 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
BRCA2P51587 RAD23BP1-201ENST00000421404 1227 ntBASIC5.81□□□□□ -1.48
BRCA2P51587 OR13C1P-201ENST00000457612 963 ntBASIC5.81□□□□□ -1.48
BRCA2P51587 RNA5SP143-201ENST00000516936 115 ntBASIC5.81□□□□□ -1.48
BRCA2P51587 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.81□□□□□ -1.48
BRCA2P51587 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.81□□□□□ -1.48
BRCA2P51587 AC098935.2-201ENST00000604222 466 ntBASIC5.81□□□□□ -1.48
BRCA2P51587 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.81□□□□□ -1.48
BRCA2P51587 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
BRCA2P51587 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
BRCA2P51587 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.81□□□□□ -1.48
BRCA2P51587 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.81□□□□□ -1.48
BRCA2P51587 NEK1-207ENST00000511633 5536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
BRCA2P51587 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.81□□□□□ -1.48
BRCA2P51587 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
BRCA2P51587 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 233.2 ms