Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.18□□□□□ -1.42
SSR1P43307 AC078899.1-201ENST00000521432 1185 ntBASIC6.18□□□□□ -1.42
SSR1P43307 OR8A2P-201ENST00000528631 952 ntBASIC6.18□□□□□ -1.42
SSR1P43307 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.18□□□□□ -1.42
SSR1P43307 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.18□□□□□ -1.42
SSR1P43307 MIR4701-201ENST00000583094 63 ntBASIC6.18□□□□□ -1.42
SSR1P43307 AL133481.2-203ENST00000607558 139 ntBASIC6.18□□□□□ -1.42
SSR1P43307 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.18□□□□□ -1.42
SSR1P43307 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.18□□□□□ -1.42
SSR1P43307 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSR1P43307 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
SSR1P43307 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC6.18□□□□□ -1.42
SSR1P43307 AL606537.1-201ENST00000607258 2011 ntBASIC6.18□□□□□ -1.42
SSR1P43307 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.18□□□□□ -1.42
SSR1P43307 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SSR1P43307 HSPD1P9-201ENST00000420325 1636 ntBASIC6.17□□□□□ -1.42
SSR1P43307 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.17□□□□□ -1.42
SSR1P43307 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.17□□□□□ -1.42
SSR1P43307 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSR1P43307 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
SSR1P43307 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSR1P43307 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.17□□□□□ -1.42
SSR1P43307 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSR1P43307 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.17□□□□□ -1.42
SSR1P43307 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
SSR1P43307 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSR1P43307 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
SSR1P43307 RN7SKP77-201ENST00000363261 353 ntBASIC6.17□□□□□ -1.42
SSR1P43307 RN7SKP97-201ENST00000410966 333 ntBASIC6.17□□□□□ -1.42
SSR1P43307 RN7SKP279-201ENST00000411383 298 ntBASIC6.17□□□□□ -1.42
SSR1P43307 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.17□□□□□ -1.42
SSR1P43307 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.17□□□□□ -1.42
SSR1P43307 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.17□□□□□ -1.42
SSR1P43307 AL445928.1-201ENST00000435545 222 ntBASIC6.17□□□□□ -1.42
SSR1P43307 NPM1P33-201ENST00000438918 872 ntBASIC6.17□□□□□ -1.42
SSR1P43307 RPL6P30-201ENST00000443382 862 ntBASIC6.17□□□□□ -1.42
SSR1P43307 RPL5P7-201ENST00000444235 813 ntBASIC6.17□□□□□ -1.42
SSR1P43307 AC093719.1-201ENST00000480427 441 ntBASIC6.17□□□□□ -1.42
SSR1P43307 NPM1P29-201ENST00000483112 803 ntBASIC6.17□□□□□ -1.42
SSR1P43307 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SSR1P43307 ST13P12-201ENST00000508958 1094 ntBASIC6.17□□□□□ -1.42
SSR1P43307 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.17□□□□□ -1.42
SSR1P43307 GAPDHP71-201ENST00000511530 1003 ntBASIC6.17□□□□□ -1.42
SSR1P43307 RN7SKP35-201ENST00000517210 151 ntBASIC6.17□□□□□ -1.42
SSR1P43307 AC009879.1-201ENST00000520029 839 ntBASIC6.17□□□□□ -1.42
SSR1P43307 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.17□□□□□ -1.42
SSR1P43307 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.17□□□□□ -1.42
SSR1P43307 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.17□□□□□ -1.42
SSR1P43307 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.17□□□□□ -1.42
SSR1P43307 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SSR1P43307 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.17□□□□□ -1.42
SSR1P43307 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.17□□□□□ -1.42
SSR1P43307 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.17□□□□□ -1.42
SSR1P43307 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SSR1P43307 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.17□□□□□ -1.42
SSR1P43307 AC092332.1-201ENST00000563684 829 ntBASIC6.17□□□□□ -1.42
SSR1P43307 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.17□□□□□ -1.42
SSR1P43307 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.17□□□□□ -1.42
SSR1P43307 AC068768.2-201ENST00000602352 343 ntBASIC6.17□□□□□ -1.42
SSR1P43307 AL513327.3-201ENST00000602618 469 ntBASIC6.17□□□□□ -1.42
SSR1P43307 AC091167.5-201ENST00000605689 894 ntBASIC6.17□□□□□ -1.42
SSR1P43307 FAM72A-208ENST00000607379 1139 ntBASIC6.17□□□□□ -1.42
SSR1P43307 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC6.17□□□□□ -1.42
SSR1P43307 AC002525.1-201ENST00000624392 1622 ntBASIC6.17□□□□□ -1.42
SSR1P43307 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSR1P43307 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSR1P43307 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SSR1P43307 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.17□□□□□ -1.42
SSR1P43307 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
SSR1P43307 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SSR1P43307 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.16□□□□□ -1.42
SSR1P43307 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SSR1P43307 AC090181.3-201ENST00000624777 1514 ntBASIC6.16□□□□□ -1.42
SSR1P43307 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
SSR1P43307 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SSR1P43307 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SSR1P43307 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
SSR1P43307 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
SSR1P43307 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SSR1P43307 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SSR1P43307 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.16□□□□□ -1.42
SSR1P43307 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SSR1P43307 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SSR1P43307 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.16□□□□□ -1.42
SSR1P43307 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SSR1P43307 RPS27AP6-201ENST00000427962 448 ntBASIC6.16□□□□□ -1.42
SSR1P43307 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.16□□□□□ -1.42
SSR1P43307 RSU1P1-201ENST00000453416 441 ntBASIC6.16□□□□□ -1.42
SSR1P43307 AC023245.1-201ENST00000468501 517 ntBASIC6.16□□□□□ -1.42
SSR1P43307 AC092865.4-201ENST00000477936 615 ntBASIC6.16□□□□□ -1.42
SSR1P43307 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.16□□□□□ -1.42
SSR1P43307 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.16□□□□□ -1.42
SSR1P43307 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.16□□□□□ -1.42
SSR1P43307 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.16□□□□□ -1.42
SSR1P43307 AL390726.5-202ENST00000564800 256 ntBASIC6.16□□□□□ -1.42
SSR1P43307 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.16□□□□□ -1.42
SSR1P43307 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.16□□□□□ -1.42
SSR1P43307 AC233702.9-201ENST00000581528 203 ntBASIC6.16□□□□□ -1.42
SSR1P43307 AP001357.1-201ENST00000586304 1053 ntBASIC6.16□□□□□ -1.42
SSR1P43307 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms